Experiment: 3-octanone 5.310333333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21342 and SM_b21343 are separated by 6 nucleotides SM_b21343 and SM_b21344 are separated by 1 nucleotides
SM_b21342: SM_b21342 - sugar uptake ABC transporter permease, at 1,007,763 to 1,008,761
_b21342
SM_b21343: SM_b21343 - sugar uptake ABC transporter permease, at 1,008,768 to 1,009,772
_b21343
SM_b21344: SM_b21344 - sugar uptake ABC transporter ATP-binding protein, at 1,009,774 to 1,011,267
_b21344
Position (kb)
1008
1009
1010 Strain fitness (log2 ratio)
-2
-1
0
1 at 1007.857 kb on + strand at 1007.978 kb on + strand, within SM_b21342 at 1007.991 kb on + strand, within SM_b21342 at 1007.991 kb on + strand, within SM_b21342 at 1007.991 kb on + strand, within SM_b21342 at 1007.992 kb on - strand, within SM_b21342 at 1008.103 kb on + strand, within SM_b21342 at 1008.227 kb on - strand, within SM_b21342 at 1008.304 kb on + strand, within SM_b21342 at 1008.305 kb on - strand, within SM_b21342 at 1008.353 kb on - strand, within SM_b21342 at 1008.481 kb on + strand, within SM_b21342 at 1008.604 kb on + strand, within SM_b21342 at 1008.605 kb on - strand, within SM_b21342 at 1008.629 kb on - strand, within SM_b21342 at 1008.872 kb on - strand, within SM_b21343 at 1009.072 kb on + strand, within SM_b21343 at 1009.072 kb on + strand, within SM_b21343 at 1009.072 kb on + strand, within SM_b21343 at 1009.073 kb on - strand, within SM_b21343 at 1009.101 kb on + strand, within SM_b21343 at 1009.697 kb on - strand at 1009.775 kb on + strand at 1009.776 kb on - strand at 1009.776 kb on - strand at 1010.089 kb on - strand, within SM_b21344 at 1010.089 kb on - strand, within SM_b21344 at 1010.089 kb on - strand, within SM_b21344 at 1010.132 kb on + strand, within SM_b21344 at 1010.133 kb on - strand, within SM_b21344 at 1010.133 kb on - strand, within SM_b21344 at 1010.241 kb on + strand, within SM_b21344 at 1010.331 kb on - strand, within SM_b21344 at 1010.568 kb on + strand, within SM_b21344 at 1010.569 kb on - strand, within SM_b21344 at 1010.725 kb on + strand, within SM_b21344 at 1010.726 kb on - strand, within SM_b21344 at 1010.726 kb on - strand, within SM_b21344
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 5.310333333 mM remove 1,007,857 + +0.2 1,007,978 + SM_b21342 0.22 +0.6 1,007,991 + SM_b21342 0.23 -0.3 1,007,991 + SM_b21342 0.23 -0.3 1,007,991 + SM_b21342 0.23 -0.1 1,007,992 - SM_b21342 0.23 +0.3 1,008,103 + SM_b21342 0.34 -1.4 1,008,227 - SM_b21342 0.46 -0.1 1,008,304 + SM_b21342 0.54 -1.1 1,008,305 - SM_b21342 0.54 -0.2 1,008,353 - SM_b21342 0.59 -0.2 1,008,481 + SM_b21342 0.72 -0.4 1,008,604 + SM_b21342 0.84 +1.6 1,008,605 - SM_b21342 0.84 -0.9 1,008,629 - SM_b21342 0.87 +0.9 1,008,872 - SM_b21343 0.10 -0.7 1,009,072 + SM_b21343 0.30 -0.8 1,009,072 + SM_b21343 0.30 -0.2 1,009,072 + SM_b21343 0.30 -0.7 1,009,073 - SM_b21343 0.30 -1.3 1,009,101 + SM_b21343 0.33 -0.8 1,009,697 - -0.6 1,009,775 + +1.0 1,009,776 - +0.3 1,009,776 - -2.2 1,010,089 - SM_b21344 0.21 -0.1 1,010,089 - SM_b21344 0.21 +1.3 1,010,089 - SM_b21344 0.21 -0.5 1,010,132 + SM_b21344 0.24 -0.1 1,010,133 - SM_b21344 0.24 +0.1 1,010,133 - SM_b21344 0.24 +0.8 1,010,241 + SM_b21344 0.31 -0.4 1,010,331 - SM_b21344 0.37 +0.2 1,010,568 + SM_b21344 0.53 +1.3 1,010,569 - SM_b21344 0.53 -0.4 1,010,725 + SM_b21344 0.64 -0.4 1,010,726 - SM_b21344 0.64 +0.8 1,010,726 - SM_b21344 0.64 -2.0
Or see this region's nucleotide sequence