Experiment: 3-octanone 5.310333333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20873 and SM_b20874 are separated by 96 nucleotides SM_b20874 and SM_b20875 overlap by 1 nucleotides SM_b20875 and SM_b20876 are separated by 77 nucleotides
SM_b20873: SM_b20873 - ureidoglycolate hydrolase, at 1,280,236 to 1,280,748
_b20873
SM_b20874: SM_b20874 - hypothetical protein, at 1,280,845 to 1,281,348
_b20874
SM_b20875: SM_b20875 - hypothetical protein, at 1,281,348 to 1,282,277
_b20875
SM_b20876: SM_b20876 - hypothetical protein, at 1,282,355 to 1,283,152
_b20876
Position (kb)
1281
1282
1283 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1280.389 kb on + strand, within SM_b20873 at 1280.391 kb on - strand, within SM_b20873 at 1280.464 kb on + strand, within SM_b20873 at 1280.552 kb on - strand, within SM_b20873 at 1280.552 kb on - strand, within SM_b20873 at 1280.739 kb on + strand at 1280.739 kb on + strand at 1280.739 kb on + strand at 1280.740 kb on - strand at 1280.740 kb on - strand at 1280.740 kb on - strand at 1281.032 kb on + strand, within SM_b20874 at 1281.032 kb on + strand, within SM_b20874 at 1281.032 kb on + strand, within SM_b20874 at 1281.033 kb on - strand, within SM_b20874 at 1281.272 kb on + strand, within SM_b20874 at 1281.273 kb on - strand, within SM_b20874 at 1281.273 kb on - strand, within SM_b20874 at 1281.439 kb on + strand at 1281.439 kb on + strand at 1281.439 kb on + strand at 1281.545 kb on - strand, within SM_b20875 at 1281.545 kb on - strand at 1281.545 kb on - strand, within SM_b20875 at 1281.545 kb on - strand, within SM_b20875 at 1281.571 kb on + strand, within SM_b20875 at 1281.571 kb on + strand, within SM_b20875 at 1281.571 kb on + strand, within SM_b20875 at 1281.641 kb on + strand, within SM_b20875 at 1281.641 kb on + strand, within SM_b20875 at 1281.644 kb on - strand, within SM_b20875 at 1281.653 kb on + strand, within SM_b20875 at 1281.654 kb on - strand, within SM_b20875 at 1281.784 kb on + strand, within SM_b20875 at 1281.784 kb on + strand, within SM_b20875 at 1281.784 kb on + strand, within SM_b20875 at 1281.785 kb on - strand, within SM_b20875 at 1281.785 kb on - strand, within SM_b20875 at 1281.857 kb on + strand, within SM_b20875 at 1281.877 kb on + strand, within SM_b20875 at 1281.878 kb on - strand, within SM_b20875 at 1281.878 kb on - strand, within SM_b20875 at 1281.976 kb on + strand, within SM_b20875 at 1281.977 kb on - strand, within SM_b20875 at 1281.977 kb on - strand, within SM_b20875 at 1282.046 kb on - strand, within SM_b20875 at 1282.051 kb on + strand, within SM_b20875 at 1282.065 kb on - strand, within SM_b20875 at 1282.171 kb on + strand, within SM_b20875 at 1282.172 kb on - strand, within SM_b20875 at 1282.308 kb on - strand at 1283.007 kb on + strand, within SM_b20876 at 1283.007 kb on + strand at 1283.007 kb on + strand, within SM_b20876 at 1283.008 kb on - strand, within SM_b20876 at 1283.145 kb on + strand at 1283.185 kb on + strand at 1283.186 kb on - strand at 1283.238 kb on + strand at 1283.267 kb on + strand at 1283.268 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 5.310333333 mM remove 1,280,389 + SM_b20873 0.30 +0.1 1,280,391 - SM_b20873 0.30 -0.4 1,280,464 + SM_b20873 0.44 +0.6 1,280,552 - SM_b20873 0.62 -0.1 1,280,552 - SM_b20873 0.62 -0.0 1,280,739 + +0.4 1,280,739 + -0.5 1,280,739 + -0.2 1,280,740 - -0.5 1,280,740 - +0.7 1,280,740 - -0.3 1,281,032 + SM_b20874 0.37 +0.7 1,281,032 + SM_b20874 0.37 +0.3 1,281,032 + SM_b20874 0.37 -0.6 1,281,033 - SM_b20874 0.37 -0.3 1,281,272 + SM_b20874 0.85 -0.1 1,281,273 - SM_b20874 0.85 +0.1 1,281,273 - SM_b20874 0.85 -0.6 1,281,439 + -0.0 1,281,439 + -1.3 1,281,439 + -2.0 1,281,545 - SM_b20875 0.21 +0.5 1,281,545 - +1.5 1,281,545 - SM_b20875 0.21 +1.1 1,281,545 - SM_b20875 0.21 +0.5 1,281,571 + SM_b20875 0.24 +1.9 1,281,571 + SM_b20875 0.24 +0.4 1,281,571 + SM_b20875 0.24 +0.6 1,281,641 + SM_b20875 0.32 +0.2 1,281,641 + SM_b20875 0.32 +0.5 1,281,644 - SM_b20875 0.32 +1.1 1,281,653 + SM_b20875 0.33 -0.3 1,281,654 - SM_b20875 0.33 +1.6 1,281,784 + SM_b20875 0.47 +0.2 1,281,784 + SM_b20875 0.47 +0.2 1,281,784 + SM_b20875 0.47 -0.9 1,281,785 - SM_b20875 0.47 +0.6 1,281,785 - SM_b20875 0.47 +0.6 1,281,857 + SM_b20875 0.55 +0.3 1,281,877 + SM_b20875 0.57 +0.4 1,281,878 - SM_b20875 0.57 +0.7 1,281,878 - SM_b20875 0.57 +0.3 1,281,976 + SM_b20875 0.68 -1.7 1,281,977 - SM_b20875 0.68 -0.4 1,281,977 - SM_b20875 0.68 -0.2 1,282,046 - SM_b20875 0.75 -0.8 1,282,051 + SM_b20875 0.76 -0.8 1,282,065 - SM_b20875 0.77 -0.3 1,282,171 + SM_b20875 0.88 +1.0 1,282,172 - SM_b20875 0.89 +0.2 1,282,308 - +0.2 1,283,007 + SM_b20876 0.82 -0.4 1,283,007 + +1.3 1,283,007 + SM_b20876 0.82 +0.8 1,283,008 - SM_b20876 0.82 -0.1 1,283,145 + -0.2 1,283,185 + -0.1 1,283,186 - +0.7 1,283,238 + +0.9 1,283,267 + -0.4 1,283,268 - +0.6
Or see this region's nucleotide sequence