Strain Fitness in Sinorhizobium meliloti 1021 around SM_b20364

Experiment: 3-octanone 5.310333333 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSM_b20363 and SM_b20364 overlap by 4 nucleotidesSM_b20364 and SM_b20365 are separated by 174 nucleotides SM_b20363: SM_b20363 - iron ABC transporter ATP-binding protein, at 373,363 to 374,424 _b20363 SM_b20364: SM_b20364 - iron ABC transporter permease, at 374,421 to 376,649 _b20364 SM_b20365: SM_b20365 - iron ABC transporter substrate-binding protein, at 376,824 to 377,852 _b20365 Position (kb) 374 375 376 377Strain fitness (log2 ratio) -2 -1 0 1at 373.488 kb on - strand, within SM_b20363at 373.509 kb on - strand, within SM_b20363at 373.509 kb on - strand, within SM_b20363at 373.844 kb on + strand, within SM_b20363at 374.098 kb on - strand, within SM_b20363at 374.117 kb on + strand, within SM_b20363at 374.160 kb on - strand, within SM_b20363at 374.205 kb on + strand, within SM_b20363at 374.206 kb on - strand, within SM_b20363at 374.206 kb on - strand, within SM_b20363at 374.206 kb on - strand, within SM_b20363at 374.383 kb on + strandat 374.383 kb on + strandat 374.384 kb on - strandat 374.384 kb on - strandat 374.384 kb on - strandat 374.384 kb on - strandat 374.384 kb on - strandat 374.609 kb on + strandat 374.612 kb on - strandat 374.612 kb on - strandat 374.612 kb on - strandat 374.923 kb on + strand, within SM_b20364at 374.923 kb on + strand, within SM_b20364at 375.020 kb on - strand, within SM_b20364at 375.157 kb on + strand, within SM_b20364at 375.157 kb on + strand, within SM_b20364at 375.158 kb on - strand, within SM_b20364at 375.158 kb on - strandat 375.158 kb on - strand, within SM_b20364at 375.696 kb on - strand, within SM_b20364at 375.887 kb on - strand, within SM_b20364at 375.887 kb on - strand, within SM_b20364at 376.043 kb on + strand, within SM_b20364at 376.576 kb on + strandat 376.653 kb on + strandat 376.653 kb on + strandat 376.653 kb on + strandat 376.654 kb on - strandat 376.695 kb on + strandat 376.695 kb on + strandat 376.696 kb on - strandat 376.696 kb on - strandat 376.894 kb on + strandat 376.894 kb on + strandat 376.895 kb on - strandat 376.910 kb on - strandat 376.910 kb on - strandat 377.039 kb on - strand, within SM_b20365at 377.275 kb on + strand, within SM_b20365at 377.329 kb on + strand, within SM_b20365at 377.330 kb on - strand, within SM_b20365at 377.449 kb on + strand, within SM_b20365at 377.473 kb on + strand, within SM_b20365at 377.554 kb on + strand, within SM_b20365at 377.554 kb on + strand, within SM_b20365

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Per-strain Table

Position Strand Gene LocusTag Fraction 3-octanone 5.310333333 mM
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373,488 - SM_b20363 0.12 +0.5
373,509 - SM_b20363 0.14 +0.4
373,509 - SM_b20363 0.14 -0.2
373,844 + SM_b20363 0.45 -0.0
374,098 - SM_b20363 0.69 +0.8
374,117 + SM_b20363 0.71 +0.8
374,160 - SM_b20363 0.75 -0.3
374,205 + SM_b20363 0.79 -0.2
374,206 - SM_b20363 0.79 +0.4
374,206 - SM_b20363 0.79 -0.5
374,206 - SM_b20363 0.79 -0.4
374,383 + +0.5
374,383 + +0.6
374,384 - -1.8
374,384 - -0.1
374,384 - +0.1
374,384 - -0.1
374,384 - -0.2
374,609 + -0.2
374,612 - -0.4
374,612 - +0.2
374,612 - +0.0
374,923 + SM_b20364 0.23 -0.1
374,923 + SM_b20364 0.23 -1.1
375,020 - SM_b20364 0.27 -0.4
375,157 + SM_b20364 0.33 -1.3
375,157 + SM_b20364 0.33 -0.2
375,158 - SM_b20364 0.33 +0.3
375,158 - +1.2
375,158 - SM_b20364 0.33 -1.4
375,696 - SM_b20364 0.57 -0.2
375,887 - SM_b20364 0.66 +0.1
375,887 - SM_b20364 0.66 +0.3
376,043 + SM_b20364 0.73 +1.5
376,576 + +0.3
376,653 + -0.4
376,653 + +0.2
376,653 + +0.4
376,654 - -0.2
376,695 + +0.2
376,695 + -0.0
376,696 - -0.8
376,696 - -0.3
376,894 + +1.2
376,894 + +1.5
376,895 - -0.7
376,910 - +0.3
376,910 - -0.4
377,039 - SM_b20365 0.21 -0.9
377,275 + SM_b20365 0.44 +0.2
377,329 + SM_b20365 0.49 -0.4
377,330 - SM_b20365 0.49 -0.1
377,449 + SM_b20365 0.61 +0.2
377,473 + SM_b20365 0.63 -1.0
377,554 + SM_b20365 0.71 +0.2
377,554 + SM_b20365 0.71 +0.1

Or see this region's nucleotide sequence