Experiment: 3-octanone 0.456 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc01511 and SMc01510 are separated by 8 nucleotides SMc01510 and SMc01509 are separated by 206 nucleotides SMc01509 and SMc01508 are separated by 47 nucleotides
SMc01511: SMc01511 - hemin transport system permease transmembrane protein, at 2,618,550 to 2,619,650
SMc01511
SMc01510: SMc01510 - hemin importer ATP-binding subunit, at 2,619,659 to 2,620,447
SMc01510
SMc01509: SMc01509 - hypothetical protein, at 2,620,654 to 2,621,016
SMc01509
SMc01508: SMc01508 - hypothetical protein, at 2,621,064 to 2,621,495
SMc01508
Position (kb)
2619
2620
2621 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2618.991 kb on + strand, within SMc01511 at 2618.991 kb on + strand, within SMc01511 at 2618.991 kb on + strand, within SMc01511 at 2618.991 kb on + strand, within SMc01511 at 2618.991 kb on + strand, within SMc01511 at 2618.992 kb on - strand, within SMc01511 at 2618.992 kb on - strand, within SMc01511 at 2618.992 kb on - strand, within SMc01511 at 2618.992 kb on - strand, within SMc01511 at 2618.992 kb on - strand, within SMc01511 at 2618.992 kb on - strand, within SMc01511 at 2618.992 kb on - strand, within SMc01511 at 2619.139 kb on + strand, within SMc01511 at 2619.139 kb on + strand, within SMc01511 at 2619.321 kb on + strand, within SMc01511 at 2619.478 kb on - strand, within SMc01511 at 2620.049 kb on + strand, within SMc01510 at 2620.050 kb on - strand, within SMc01510 at 2620.050 kb on - strand, within SMc01510 at 2620.142 kb on + strand, within SMc01510 at 2620.142 kb on + strand, within SMc01510 at 2620.142 kb on + strand, within SMc01510 at 2620.143 kb on - strand, within SMc01510 at 2620.143 kb on - strand, within SMc01510 at 2620.143 kb on - strand, within SMc01510 at 2620.267 kb on + strand, within SMc01510 at 2620.267 kb on + strand, within SMc01510 at 2620.267 kb on + strand, within SMc01510 at 2620.268 kb on - strand, within SMc01510 at 2620.422 kb on + strand at 2620.445 kb on + strand at 2620.445 kb on + strand at 2620.445 kb on + strand at 2620.445 kb on + strand at 2620.446 kb on - strand at 2620.479 kb on - strand at 2620.527 kb on - strand at 2620.742 kb on + strand, within SMc01509 at 2620.906 kb on + strand, within SMc01509 at 2621.046 kb on - strand at 2621.046 kb on - strand at 2621.058 kb on + strand at 2621.059 kb on - strand at 2621.059 kb on - strand at 2621.059 kb on - strand at 2621.059 kb on - strand at 2621.059 kb on - strand at 2621.064 kb on - strand at 2621.131 kb on - strand, within SMc01508 at 2621.133 kb on - strand, within SMc01508 at 2621.184 kb on + strand, within SMc01508 at 2621.230 kb on - strand, within SMc01508
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 0.456 mM remove 2,618,991 + SMc01511 0.40 -0.6 2,618,991 + SMc01511 0.40 -1.4 2,618,991 + SMc01511 0.40 +0.2 2,618,991 + SMc01511 0.40 -0.4 2,618,991 + SMc01511 0.40 -0.5 2,618,992 - SMc01511 0.40 -1.1 2,618,992 - SMc01511 0.40 +0.0 2,618,992 - SMc01511 0.40 -0.4 2,618,992 - SMc01511 0.40 +0.1 2,618,992 - SMc01511 0.40 +0.9 2,618,992 - SMc01511 0.40 -0.9 2,618,992 - SMc01511 0.40 +0.2 2,619,139 + SMc01511 0.53 +0.2 2,619,139 + SMc01511 0.53 -0.2 2,619,321 + SMc01511 0.70 +0.4 2,619,478 - SMc01511 0.84 +0.1 2,620,049 + SMc01510 0.49 +0.2 2,620,050 - SMc01510 0.50 +0.1 2,620,050 - SMc01510 0.50 +0.1 2,620,142 + SMc01510 0.61 -1.6 2,620,142 + SMc01510 0.61 -0.3 2,620,142 + SMc01510 0.61 -0.3 2,620,143 - SMc01510 0.61 +0.0 2,620,143 - SMc01510 0.61 -0.1 2,620,143 - SMc01510 0.61 -0.3 2,620,267 + SMc01510 0.77 -0.6 2,620,267 + SMc01510 0.77 -0.3 2,620,267 + SMc01510 0.77 -0.2 2,620,268 - SMc01510 0.77 -0.6 2,620,422 + -0.1 2,620,445 + -0.2 2,620,445 + +0.6 2,620,445 + +0.4 2,620,445 + -1.1 2,620,446 - +0.5 2,620,479 - +0.2 2,620,527 - +0.8 2,620,742 + SMc01509 0.24 -0.1 2,620,906 + SMc01509 0.69 -0.7 2,621,046 - +0.4 2,621,046 - +0.1 2,621,058 + -0.6 2,621,059 - +0.4 2,621,059 - +0.6 2,621,059 - -2.1 2,621,059 - +0.3 2,621,059 - +2.0 2,621,064 - +0.4 2,621,131 - SMc01508 0.16 -0.4 2,621,133 - SMc01508 0.16 +0.6 2,621,184 + SMc01508 0.28 -0.4 2,621,230 - SMc01508 0.38 +0.9
Or see this region's nucleotide sequence