Experiment: 3-octanone 0.456 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20585 and SM_b20586 are separated by 122 nucleotides SM_b20586 and SM_b20587 are separated by 130 nucleotides
SM_b20585: SM_b20585 - gamma-glutamyltranspeptidase, at 1,599,584 to 1,601,329
_b20585
SM_b20586: SM_b20586 - IclR family transcriptional regulator, at 1,601,452 to 1,602,207
_b20586
SM_b20587: SM_b20587 - CoA-transferase subunit A protein, at 1,602,338 to 1,603,198
_b20587
Position (kb)
1601
1602
1603 Strain fitness (log2 ratio)
-2
-1
0
1 at 1600.491 kb on - strand, within SM_b20585 at 1600.491 kb on - strand, within SM_b20585 at 1600.499 kb on + strand, within SM_b20585 at 1600.500 kb on - strand, within SM_b20585 at 1600.550 kb on + strand, within SM_b20585 at 1600.550 kb on + strand, within SM_b20585 at 1600.550 kb on + strand, within SM_b20585 at 1600.551 kb on - strand, within SM_b20585 at 1600.551 kb on - strand, within SM_b20585 at 1600.625 kb on + strand, within SM_b20585 at 1600.625 kb on + strand, within SM_b20585 at 1600.767 kb on - strand, within SM_b20585 at 1600.767 kb on - strand, within SM_b20585 at 1600.875 kb on - strand, within SM_b20585 at 1601.126 kb on + strand, within SM_b20585 at 1601.126 kb on + strand, within SM_b20585 at 1601.802 kb on - strand, within SM_b20586 at 1601.871 kb on - strand, within SM_b20586 at 1601.942 kb on + strand, within SM_b20586 at 1601.943 kb on - strand, within SM_b20586 at 1601.943 kb on - strand, within SM_b20586 at 1601.955 kb on + strand, within SM_b20586 at 1601.981 kb on + strand, within SM_b20586 at 1601.982 kb on - strand, within SM_b20586 at 1601.982 kb on - strand, within SM_b20586 at 1601.982 kb on - strand, within SM_b20586 at 1602.211 kb on - strand at 1602.307 kb on + strand at 1602.307 kb on + strand at 1602.370 kb on - strand at 1602.370 kb on - strand at 1602.394 kb on + strand at 1602.432 kb on - strand, within SM_b20587 at 1602.506 kb on + strand, within SM_b20587 at 1602.507 kb on - strand, within SM_b20587 at 1602.668 kb on + strand, within SM_b20587 at 1602.669 kb on - strand, within SM_b20587 at 1602.714 kb on - strand, within SM_b20587 at 1602.733 kb on + strand, within SM_b20587 at 1602.733 kb on + strand, within SM_b20587 at 1602.748 kb on + strand, within SM_b20587 at 1603.034 kb on + strand, within SM_b20587 at 1603.035 kb on - strand, within SM_b20587 at 1603.046 kb on + strand, within SM_b20587 at 1603.046 kb on + strand, within SM_b20587 at 1603.047 kb on - strand, within SM_b20587 at 1603.049 kb on + strand, within SM_b20587 at 1603.050 kb on - strand, within SM_b20587 at 1603.070 kb on + strand, within SM_b20587 at 1603.071 kb on - strand, within SM_b20587 at 1603.071 kb on - strand, within SM_b20587 at 1603.071 kb on - strand, within SM_b20587 at 1603.071 kb on - strand, within SM_b20587
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 0.456 mM remove 1,600,491 - SM_b20585 0.52 -0.4 1,600,491 - SM_b20585 0.52 -1.3 1,600,499 + SM_b20585 0.52 -2.0 1,600,500 - SM_b20585 0.52 -0.4 1,600,550 + SM_b20585 0.55 +0.2 1,600,550 + SM_b20585 0.55 -0.4 1,600,550 + SM_b20585 0.55 -0.2 1,600,551 - SM_b20585 0.55 -0.4 1,600,551 - SM_b20585 0.55 +0.1 1,600,625 + SM_b20585 0.60 +1.1 1,600,625 + SM_b20585 0.60 +0.4 1,600,767 - SM_b20585 0.68 -0.0 1,600,767 - SM_b20585 0.68 -1.0 1,600,875 - SM_b20585 0.74 -0.5 1,601,126 + SM_b20585 0.88 +0.2 1,601,126 + SM_b20585 0.88 -0.8 1,601,802 - SM_b20586 0.46 -1.2 1,601,871 - SM_b20586 0.55 -2.1 1,601,942 + SM_b20586 0.65 -0.5 1,601,943 - SM_b20586 0.65 -2.2 1,601,943 - SM_b20586 0.65 -0.5 1,601,955 + SM_b20586 0.67 +0.0 1,601,981 + SM_b20586 0.70 -2.0 1,601,982 - SM_b20586 0.70 +0.7 1,601,982 - SM_b20586 0.70 -1.0 1,601,982 - SM_b20586 0.70 +0.1 1,602,211 - -0.1 1,602,307 + +0.3 1,602,307 + -0.1 1,602,370 - -1.2 1,602,370 - +0.7 1,602,394 + -1.1 1,602,432 - SM_b20587 0.11 -0.1 1,602,506 + SM_b20587 0.20 -0.1 1,602,507 - SM_b20587 0.20 +0.3 1,602,668 + SM_b20587 0.38 +0.1 1,602,669 - SM_b20587 0.38 -0.2 1,602,714 - SM_b20587 0.44 -0.8 1,602,733 + SM_b20587 0.46 -0.2 1,602,733 + SM_b20587 0.46 -1.2 1,602,748 + SM_b20587 0.48 -0.7 1,603,034 + SM_b20587 0.81 -0.6 1,603,035 - SM_b20587 0.81 -0.3 1,603,046 + SM_b20587 0.82 -0.2 1,603,046 + SM_b20587 0.82 +0.2 1,603,047 - SM_b20587 0.82 +0.3 1,603,049 + SM_b20587 0.83 +0.3 1,603,050 - SM_b20587 0.83 -0.5 1,603,070 + SM_b20587 0.85 -1.1 1,603,071 - SM_b20587 0.85 -0.9 1,603,071 - SM_b20587 0.85 -0.6 1,603,071 - SM_b20587 0.85 -0.9 1,603,071 - SM_b20587 0.85 +0.8
Or see this region's nucleotide sequence