Experiment: 3-octanone 0.456 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20136 and SM_b20137 are separated by 141 nucleotides SM_b20137 and SM_b20138 are separated by 39 nucleotides
SM_b20136: SM_b20136 - hypothetical protein, at 149,680 to 151,053
_b20136
SM_b20137: SM_b20137 - hypothetical protein, at 151,195 to 152,136
_b20137
SM_b20138: SM_b20138 - hypothetical protein, at 152,176 to 153,102
_b20138
Position (kb)
151
152
153 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 150.249 kb on - strand, within SM_b20136 at 150.327 kb on - strand, within SM_b20136 at 150.361 kb on + strand, within SM_b20136 at 150.361 kb on + strand, within SM_b20136 at 150.362 kb on - strand, within SM_b20136 at 150.590 kb on + strand, within SM_b20136 at 150.634 kb on + strand, within SM_b20136 at 150.634 kb on + strand, within SM_b20136 at 150.635 kb on - strand, within SM_b20136 at 150.650 kb on + strand at 150.651 kb on - strand, within SM_b20136 at 150.785 kb on + strand, within SM_b20136 at 150.785 kb on + strand, within SM_b20136 at 150.985 kb on + strand at 150.986 kb on - strand at 150.998 kb on + strand at 150.999 kb on - strand at 151.054 kb on - strand at 151.056 kb on + strand at 151.056 kb on + strand at 151.057 kb on - strand at 151.057 kb on - strand at 151.206 kb on + strand at 151.207 kb on - strand at 151.238 kb on + strand at 151.238 kb on + strand at 151.239 kb on - strand at 151.242 kb on + strand at 151.518 kb on - strand, within SM_b20137 at 151.562 kb on + strand, within SM_b20137 at 151.655 kb on + strand, within SM_b20137 at 151.655 kb on + strand, within SM_b20137 at 151.655 kb on + strand, within SM_b20137 at 151.655 kb on + strand, within SM_b20137 at 151.655 kb on + strand at 151.656 kb on - strand, within SM_b20137 at 151.656 kb on - strand, within SM_b20137 at 151.853 kb on + strand, within SM_b20137 at 151.853 kb on + strand, within SM_b20137 at 151.907 kb on + strand, within SM_b20137 at 151.908 kb on - strand, within SM_b20137 at 151.908 kb on - strand, within SM_b20137 at 151.916 kb on + strand, within SM_b20137 at 151.965 kb on + strand, within SM_b20137 at 152.025 kb on + strand, within SM_b20137 at 152.026 kb on - strand, within SM_b20137 at 152.027 kb on + strand, within SM_b20137 at 152.027 kb on + strand, within SM_b20137 at 152.027 kb on + strand, within SM_b20137 at 152.027 kb on + strand, within SM_b20137 at 152.027 kb on + strand, within SM_b20137 at 152.028 kb on - strand, within SM_b20137 at 152.028 kb on - strand, within SM_b20137 at 152.028 kb on - strand, within SM_b20137 at 152.028 kb on - strand, within SM_b20137 at 152.028 kb on - strand, within SM_b20137 at 152.028 kb on - strand, within SM_b20137 at 152.139 kb on + strand at 152.139 kb on + strand at 152.140 kb on - strand at 152.140 kb on - strand at 152.291 kb on + strand, within SM_b20138 at 152.291 kb on + strand, within SM_b20138 at 152.292 kb on - strand, within SM_b20138 at 152.478 kb on - strand, within SM_b20138 at 152.478 kb on - strand, within SM_b20138 at 152.523 kb on - strand, within SM_b20138 at 152.616 kb on - strand, within SM_b20138 at 152.616 kb on - strand, within SM_b20138 at 152.711 kb on + strand, within SM_b20138 at 152.754 kb on - strand, within SM_b20138 at 152.802 kb on - strand, within SM_b20138 at 152.802 kb on - strand, within SM_b20138 at 152.813 kb on + strand at 152.876 kb on + strand, within SM_b20138 at 152.876 kb on + strand, within SM_b20138 at 152.877 kb on - strand, within SM_b20138 at 152.877 kb on - strand, within SM_b20138 at 152.877 kb on - strand, within SM_b20138 at 152.877 kb on - strand, within SM_b20138 at 152.924 kb on + strand, within SM_b20138 at 152.925 kb on - strand, within SM_b20138 at 152.925 kb on - strand, within SM_b20138 at 152.925 kb on - strand, within SM_b20138 at 152.990 kb on + strand, within SM_b20138 at 152.991 kb on - strand, within SM_b20138 at 152.991 kb on - strand, within SM_b20138 at 152.991 kb on - strand, within SM_b20138 at 152.991 kb on - strand, within SM_b20138 at 152.993 kb on + strand, within SM_b20138 at 152.994 kb on - strand, within SM_b20138 at 152.994 kb on - strand, within SM_b20138 at 152.994 kb on - strand, within SM_b20138 at 153.087 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 0.456 mM remove 150,249 - SM_b20136 0.41 -0.2 150,327 - SM_b20136 0.47 -0.6 150,361 + SM_b20136 0.50 +0.0 150,361 + SM_b20136 0.50 +0.8 150,362 - SM_b20136 0.50 +0.2 150,590 + SM_b20136 0.66 -0.1 150,634 + SM_b20136 0.69 +1.8 150,634 + SM_b20136 0.69 +0.5 150,635 - SM_b20136 0.70 +0.1 150,650 + -0.4 150,651 - SM_b20136 0.71 -0.7 150,785 + SM_b20136 0.80 -0.1 150,785 + SM_b20136 0.80 -2.2 150,985 + +0.3 150,986 - -0.9 150,998 + -0.3 150,999 - +0.2 151,054 - +0.3 151,056 + -0.1 151,056 + -0.3 151,057 - -0.6 151,057 - -1.1 151,206 + +0.2 151,207 - -0.8 151,238 + +0.6 151,238 + -0.5 151,239 - +0.0 151,242 + -0.1 151,518 - SM_b20137 0.34 -0.7 151,562 + SM_b20137 0.39 -0.0 151,655 + SM_b20137 0.49 -0.5 151,655 + SM_b20137 0.49 -1.2 151,655 + SM_b20137 0.49 +0.1 151,655 + SM_b20137 0.49 -0.3 151,655 + -0.4 151,656 - SM_b20137 0.49 -1.7 151,656 - SM_b20137 0.49 +0.5 151,853 + SM_b20137 0.70 -0.5 151,853 + SM_b20137 0.70 +0.7 151,907 + SM_b20137 0.76 -1.4 151,908 - SM_b20137 0.76 +0.2 151,908 - SM_b20137 0.76 -0.6 151,916 + SM_b20137 0.77 +0.2 151,965 + SM_b20137 0.82 +0.4 152,025 + SM_b20137 0.88 -0.8 152,026 - SM_b20137 0.88 -1.8 152,027 + SM_b20137 0.88 -0.7 152,027 + SM_b20137 0.88 -0.2 152,027 + SM_b20137 0.88 +0.5 152,027 + SM_b20137 0.88 -0.2 152,027 + SM_b20137 0.88 +0.0 152,028 - SM_b20137 0.88 +1.7 152,028 - SM_b20137 0.88 -0.8 152,028 - SM_b20137 0.88 +0.4 152,028 - SM_b20137 0.88 +1.2 152,028 - SM_b20137 0.88 +0.9 152,028 - SM_b20137 0.88 -0.1 152,139 + +0.5 152,139 + -0.6 152,140 - -0.1 152,140 - -1.1 152,291 + SM_b20138 0.12 +0.1 152,291 + SM_b20138 0.12 +0.1 152,292 - SM_b20138 0.13 +0.1 152,478 - SM_b20138 0.33 +0.6 152,478 - SM_b20138 0.33 -0.5 152,523 - SM_b20138 0.37 -1.4 152,616 - SM_b20138 0.47 -1.0 152,616 - SM_b20138 0.47 -1.2 152,711 + SM_b20138 0.58 +0.1 152,754 - SM_b20138 0.62 -0.2 152,802 - SM_b20138 0.68 -0.3 152,802 - SM_b20138 0.68 +0.1 152,813 + -0.9 152,876 + SM_b20138 0.76 -0.6 152,876 + SM_b20138 0.76 -0.0 152,877 - SM_b20138 0.76 -1.2 152,877 - SM_b20138 0.76 -0.4 152,877 - SM_b20138 0.76 +1.3 152,877 - SM_b20138 0.76 -0.7 152,924 + SM_b20138 0.81 -1.6 152,925 - SM_b20138 0.81 -0.9 152,925 - SM_b20138 0.81 -0.9 152,925 - SM_b20138 0.81 +0.6 152,990 + SM_b20138 0.88 -0.1 152,991 - SM_b20138 0.88 +1.1 152,991 - SM_b20138 0.88 +0.3 152,991 - SM_b20138 0.88 -1.9 152,991 - SM_b20138 0.88 -1.9 152,993 + SM_b20138 0.88 +0.6 152,994 - SM_b20138 0.88 +0.3 152,994 - SM_b20138 0.88 -0.7 152,994 - SM_b20138 0.88 +0.5 153,087 + -0.2
Or see this region's nucleotide sequence