Experiment: 3-octanone 0.456 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02085 and SMc02084 are separated by 6 nucleotides SMc02084 and SMc02083 are separated by 975 nucleotides
SMc02085: SMc02085 - biopolymer transport transmembrane protein, at 1,626,342 to 1,627,328
SMc02085
SMc02084: SMc02084 - biopolymer transport transmembrane protein, at 1,627,335 to 1,627,760
SMc02084
SMc02083: SMc02083 - methyltransferase (PCM-like) transmembrane protein, at 1,628,736 to 1,629,395
SMc02083
Position (kb)
1627
1628 Strain fitness (log2 ratio)
-1
0
1 at 1626.440 kb on - strand at 1626.440 kb on - strand at 1626.440 kb on - strand at 1626.440 kb on - strand at 1626.718 kb on - strand, within SMc02085 at 1626.718 kb on - strand, within SMc02085 at 1626.734 kb on + strand, within SMc02085 at 1627.155 kb on + strand, within SMc02085 at 1627.155 kb on + strand, within SMc02085 at 1627.156 kb on - strand, within SMc02085 at 1627.156 kb on - strand, within SMc02085 at 1627.161 kb on + strand, within SMc02085 at 1627.161 kb on + strand, within SMc02085 at 1627.161 kb on + strand, within SMc02085 at 1627.185 kb on + strand, within SMc02085 at 1627.186 kb on - strand, within SMc02085 at 1627.231 kb on + strand at 1627.231 kb on + strand at 1627.232 kb on - strand at 1627.669 kb on - strand, within SMc02084 at 1627.903 kb on + strand at 1627.913 kb on + strand at 1627.913 kb on + strand at 1627.914 kb on - strand at 1627.936 kb on - strand at 1627.936 kb on - strand at 1627.936 kb on - strand at 1627.936 kb on - strand at 1627.936 kb on - strand at 1627.936 kb on - strand at 1628.045 kb on - strand at 1628.045 kb on - strand at 1628.180 kb on - strand at 1628.180 kb on - strand at 1628.316 kb on + strand at 1628.316 kb on + strand at 1628.316 kb on + strand at 1628.316 kb on + strand at 1628.316 kb on + strand at 1628.316 kb on + strand at 1628.316 kb on + strand at 1628.322 kb on + strand at 1628.322 kb on + strand at 1628.371 kb on + strand at 1628.372 kb on - strand at 1628.372 kb on - strand at 1628.390 kb on + strand at 1628.545 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 0.456 mM remove 1,626,440 - +0.5 1,626,440 - -0.3 1,626,440 - -0.1 1,626,440 - -0.8 1,626,718 - SMc02085 0.38 -1.0 1,626,718 - SMc02085 0.38 +0.0 1,626,734 + SMc02085 0.40 +0.2 1,627,155 + SMc02085 0.82 -0.1 1,627,155 + SMc02085 0.82 +0.0 1,627,156 - SMc02085 0.82 +0.7 1,627,156 - SMc02085 0.82 +0.1 1,627,161 + SMc02085 0.83 +0.8 1,627,161 + SMc02085 0.83 +0.0 1,627,161 + SMc02085 0.83 +0.4 1,627,185 + SMc02085 0.85 +0.2 1,627,186 - SMc02085 0.86 -1.1 1,627,231 + -1.3 1,627,231 + -0.6 1,627,232 - +0.7 1,627,669 - SMc02084 0.78 +1.1 1,627,903 + +0.4 1,627,913 + -0.3 1,627,913 + +0.2 1,627,914 - -0.9 1,627,936 - -0.2 1,627,936 - -0.5 1,627,936 - -1.6 1,627,936 - +0.3 1,627,936 - +0.0 1,627,936 - +0.1 1,628,045 - +0.3 1,628,045 - +0.1 1,628,180 - -0.2 1,628,180 - +0.3 1,628,316 + -0.4 1,628,316 + +0.4 1,628,316 + -0.1 1,628,316 + +0.1 1,628,316 + +1.2 1,628,316 + -0.0 1,628,316 + -0.4 1,628,322 + +0.4 1,628,322 + -0.3 1,628,371 + -0.4 1,628,372 - +0.2 1,628,372 - +0.7 1,628,390 + -0.3 1,628,545 + +0.8
Or see this region's nucleotide sequence