Experiment: 3-octanone 0.456 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa2361 and SMa2363 are separated by 11 nucleotides SMa2363 and SMa2365 overlap by 4 nucleotides
SMa2361: SMa2361 - hypothetical protein, at 1,331,764 to 1,332,750
SMa2361
SMa2363: SMa2363 - amidase, at 1,332,762 to 1,334,177
SMa2363
SMa2365: SMa2365 - ABC transporter ATP-binding protein, at 1,334,174 to 1,335,700
SMa2365
Position (kb)
1332
1333
1334
1335 Strain fitness (log2 ratio)
-2
-1
0
1 at 1331.962 kb on + strand, within SMa2361 at 1331.963 kb on - strand, within SMa2361 at 1331.963 kb on - strand, within SMa2361 at 1332.017 kb on - strand, within SMa2361 at 1332.055 kb on + strand, within SMa2361 at 1332.056 kb on - strand, within SMa2361 at 1332.056 kb on - strand, within SMa2361 at 1332.484 kb on + strand, within SMa2361 at 1332.595 kb on + strand, within SMa2361 at 1332.595 kb on + strand, within SMa2361 at 1332.595 kb on + strand, within SMa2361 at 1332.596 kb on - strand, within SMa2361 at 1332.596 kb on - strand, within SMa2361 at 1332.640 kb on + strand, within SMa2361 at 1332.641 kb on - strand, within SMa2361 at 1332.641 kb on - strand, within SMa2361 at 1332.744 kb on + strand at 1332.745 kb on - strand at 1332.745 kb on - strand at 1332.749 kb on - strand at 1333.261 kb on + strand, within SMa2363 at 1333.519 kb on + strand, within SMa2363 at 1333.519 kb on + strand, within SMa2363 at 1333.519 kb on + strand, within SMa2363 at 1333.773 kb on - strand, within SMa2363 at 1333.871 kb on - strand, within SMa2363 at 1333.877 kb on + strand, within SMa2363 at 1333.878 kb on - strand, within SMa2363 at 1333.878 kb on - strand, within SMa2363 at 1334.336 kb on + strand, within SMa2365 at 1334.337 kb on - strand, within SMa2365 at 1334.358 kb on + strand, within SMa2365 at 1334.358 kb on + strand, within SMa2365 at 1334.359 kb on - strand, within SMa2365 at 1334.418 kb on + strand, within SMa2365 at 1334.419 kb on - strand, within SMa2365 at 1334.419 kb on - strand, within SMa2365 at 1334.419 kb on - strand, within SMa2365 at 1334.643 kb on - strand, within SMa2365 at 1334.656 kb on + strand, within SMa2365 at 1334.656 kb on + strand, within SMa2365 at 1334.657 kb on - strand, within SMa2365 at 1335.034 kb on + strand, within SMa2365
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 0.456 mM remove 1,331,962 + SMa2361 0.20 +0.1 1,331,963 - SMa2361 0.20 -0.1 1,331,963 - SMa2361 0.20 -0.0 1,332,017 - SMa2361 0.26 -0.3 1,332,055 + SMa2361 0.29 -0.2 1,332,056 - SMa2361 0.30 +0.6 1,332,056 - SMa2361 0.30 -0.0 1,332,484 + SMa2361 0.73 -0.7 1,332,595 + SMa2361 0.84 -0.3 1,332,595 + SMa2361 0.84 +0.1 1,332,595 + SMa2361 0.84 +0.5 1,332,596 - SMa2361 0.84 -0.2 1,332,596 - SMa2361 0.84 -0.1 1,332,640 + SMa2361 0.89 -0.6 1,332,641 - SMa2361 0.89 -0.0 1,332,641 - SMa2361 0.89 -0.6 1,332,744 + +0.3 1,332,745 - -0.9 1,332,745 - -2.1 1,332,749 - +0.3 1,333,261 + SMa2363 0.35 +0.2 1,333,519 + SMa2363 0.53 +0.3 1,333,519 + SMa2363 0.53 -0.3 1,333,519 + SMa2363 0.53 +0.7 1,333,773 - SMa2363 0.71 +0.1 1,333,871 - SMa2363 0.78 -0.1 1,333,877 + SMa2363 0.79 +0.3 1,333,878 - SMa2363 0.79 +0.8 1,333,878 - SMa2363 0.79 +0.5 1,334,336 + SMa2365 0.11 +0.5 1,334,337 - SMa2365 0.11 +0.3 1,334,358 + SMa2365 0.12 -0.3 1,334,358 + SMa2365 0.12 -0.1 1,334,359 - SMa2365 0.12 -0.9 1,334,418 + SMa2365 0.16 -1.2 1,334,419 - SMa2365 0.16 +0.9 1,334,419 - SMa2365 0.16 +0.5 1,334,419 - SMa2365 0.16 -0.1 1,334,643 - SMa2365 0.31 -1.3 1,334,656 + SMa2365 0.32 -1.0 1,334,656 + SMa2365 0.32 +0.3 1,334,657 - SMa2365 0.32 +0.3 1,335,034 + SMa2365 0.56 +0.9
Or see this region's nucleotide sequence