Experiment: 3-octanone 0.456 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0758 and SMa0759 are separated by 230 nucleotides SMa0759 and SMa0760 are separated by 48 nucleotides SMa0760 and SMa0762 are separated by 79 nucleotides SMa0762 and SMa0763 are separated by 11 nucleotides
SMa0758: SMa0758 - hypothetical protein, at 411,107 to 411,682
SMa0758
SMa0759: SMa0759 - hypothetical protein, at 411,913 to 412,314
SMa0759
SMa0760: SMa0760 - FixT2 anti-kinase, at 412,363 to 412,710
SMa0760
SMa0762: SMa0762 - transcriptional regulator FixK, at 412,790 to 413,425
SMa0762
SMa0763: SMa0763 - hypothetical protein, at 413,437 to 414,084
SMa0763
Position (kb) 412
413 Strain fitness (log2 ratio) -1
0
1
2
3 at 411.823 kb on + strand at 411.823 kb on + strand at 411.823 kb on + strand at 411.845 kb on + strand at 411.859 kb on + strand at 411.859 kb on + strand at 411.860 kb on - strand at 411.908 kb on + strand at 411.909 kb on - strand at 411.909 kb on - strand at 411.909 kb on - strand at 411.972 kb on + strand, within SMa0759 at 412.059 kb on + strand, within SMa0759 at 412.059 kb on + strand, within SMa0759 at 412.060 kb on - strand, within SMa0759 at 412.138 kb on + strand, within SMa0759 at 412.448 kb on - strand, within SMa0760 at 412.633 kb on + strand, within SMa0760 at 412.705 kb on - strand at 412.718 kb on + strand at 412.734 kb on + strand at 412.794 kb on - strand at 413.544 kb on + strand, within SMa0763 at 413.597 kb on + strand, within SMa0763 at 413.598 kb on - strand, within SMa0763 at 413.615 kb on + strand, within SMa0763 at 413.640 kb on - strand, within SMa0763 at 413.650 kb on + strand, within SMa0763 at 413.651 kb on - strand, within SMa0763
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 0.456 mM remove 411,823 + -1.4 411,823 + -0.3 411,823 + +0.5 411,845 + +2.9 411,859 + -0.1 411,859 + -0.1 411,860 - -1.0 411,908 + +0.3 411,909 - -1.2 411,909 - +1.3 411,909 - +1.9 411,972 + SMa0759 0.15 +0.9 412,059 + SMa0759 0.36 -0.1 412,059 + SMa0759 0.36 -0.7 412,060 - SMa0759 0.37 +1.9 412,138 + SMa0759 0.56 -1.7 412,448 - SMa0760 0.24 +0.1 412,633 + SMa0760 0.78 +0.7 412,705 - +1.4 412,718 + +1.5 412,734 + -0.7 412,794 - +0.3 413,544 + SMa0763 0.17 +0.6 413,597 + SMa0763 0.25 -0.5 413,598 - SMa0763 0.25 -0.4 413,615 + SMa0763 0.27 +0.3 413,640 - SMa0763 0.31 -0.9 413,650 + SMa0763 0.33 -0.8 413,651 - SMa0763 0.33 -0.8
Or see this region's nucleotide sequence