Experiment: 3-octanone 0.456 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20507 and SM_b20508 are separated by 64 nucleotides SM_b20508 and SM_b20509 are separated by 188 nucleotides
SM_b20507: SM_b20507 - L-arabinose transporter ATP-binding protein, at 528,861 to 530,387
_b20507
SM_b20508: SM_b20508 - sugar ABC transporter substrate-binding protein, at 530,452 to 531,435
_b20508
SM_b20509: SM_b20509 - transcriptional regulator, at 531,624 to 532,391
_b20509
Position (kb) 530
531
532 Strain fitness (log2 ratio) -2
-1
0
1
2 at 529.489 kb on + strand, within SM_b20507 at 529.804 kb on + strand, within SM_b20507 at 529.804 kb on + strand, within SM_b20507 at 529.804 kb on + strand, within SM_b20507 at 529.804 kb on + strand, within SM_b20507 at 529.804 kb on + strand, within SM_b20507 at 529.805 kb on - strand, within SM_b20507 at 529.805 kb on - strand, within SM_b20507 at 529.817 kb on + strand, within SM_b20507 at 530.115 kb on + strand, within SM_b20507 at 530.179 kb on + strand, within SM_b20507 at 530.199 kb on + strand, within SM_b20507 at 530.200 kb on - strand, within SM_b20507 at 530.247 kb on + strand at 530.247 kb on + strand at 530.486 kb on + strand at 530.486 kb on + strand at 530.487 kb on - strand at 530.487 kb on - strand at 530.487 kb on - strand at 530.487 kb on - strand at 530.487 kb on - strand at 530.561 kb on + strand, within SM_b20508 at 530.561 kb on + strand, within SM_b20508 at 530.561 kb on + strand, within SM_b20508 at 530.561 kb on + strand, within SM_b20508 at 530.562 kb on - strand, within SM_b20508 at 530.562 kb on - strand, within SM_b20508 at 530.562 kb on - strand, within SM_b20508 at 530.562 kb on - strand, within SM_b20508 at 530.562 kb on - strand, within SM_b20508 at 530.942 kb on + strand, within SM_b20508 at 530.943 kb on - strand, within SM_b20508 at 531.048 kb on + strand, within SM_b20508 at 531.229 kb on + strand, within SM_b20508 at 531.358 kb on + strand at 531.426 kb on + strand at 531.426 kb on + strand at 531.480 kb on + strand at 531.480 kb on + strand at 531.910 kb on + strand, within SM_b20509 at 531.910 kb on + strand, within SM_b20509 at 531.974 kb on + strand, within SM_b20509
Per-strain Table
Position Strand Gene LocusTag Fraction 3-octanone 0.456 mM remove 529,489 + SM_b20507 0.41 -0.5 529,804 + SM_b20507 0.62 +0.8 529,804 + SM_b20507 0.62 -0.0 529,804 + SM_b20507 0.62 +0.3 529,804 + SM_b20507 0.62 -0.4 529,804 + SM_b20507 0.62 -0.0 529,805 - SM_b20507 0.62 +0.5 529,805 - SM_b20507 0.62 -0.4 529,817 + SM_b20507 0.63 -0.0 530,115 + SM_b20507 0.82 +0.0 530,179 + SM_b20507 0.86 -0.7 530,199 + SM_b20507 0.88 +0.1 530,200 - SM_b20507 0.88 -0.7 530,247 + +0.9 530,247 + +0.1 530,486 + -0.1 530,486 + +1.2 530,487 - -0.2 530,487 - -0.3 530,487 - +0.4 530,487 - +0.1 530,487 - -0.2 530,561 + SM_b20508 0.11 -1.0 530,561 + SM_b20508 0.11 +0.3 530,561 + SM_b20508 0.11 -0.7 530,561 + SM_b20508 0.11 +0.6 530,562 - SM_b20508 0.11 -0.2 530,562 - SM_b20508 0.11 -1.4 530,562 - SM_b20508 0.11 -0.3 530,562 - SM_b20508 0.11 -1.7 530,562 - SM_b20508 0.11 +0.0 530,942 + SM_b20508 0.50 -0.4 530,943 - SM_b20508 0.50 -0.8 531,048 + SM_b20508 0.61 -1.0 531,229 + SM_b20508 0.79 -0.2 531,358 + -0.1 531,426 + -2.5 531,426 + +1.0 531,480 + -0.1 531,480 + +0.1 531,910 + SM_b20509 0.37 +0.1 531,910 + SM_b20509 0.37 +0.5 531,974 + SM_b20509 0.46 +2.1
Or see this region's nucleotide sequence