Experiment: 1-octen-3-ol 0.4933903333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0738 and SMa0739 are separated by 100 nucleotides SMa0739 and SMa0740 are separated by 282 nucleotides SMa0740 and SMa0742 are separated by 137 nucleotides SMa0742 and SMa0744 are separated by 419 nucleotides
SMa0738: SMa0738 - CspA6 cold shock protein transcriptional regulator, at 396,650 to 396,853
SMa0738
SMa0739: SMa0739 - hypothetical protein, at 396,954 to 397,382
SMa0739
SMa0740: SMa0740 - hypothetical protein, at 397,665 to 398,045
SMa0740
SMa0742: SMa0742 - hypothetical protein, at 398,183 to 398,623
SMa0742
SMa0744: SMa0744 - molecular chaperone GroEL, at 399,043 to 400,680
SMa0744
Position (kb) 397
398
399 Strain fitness (log2 ratio) -2
-1
0
1
2 at 396.711 kb on + strand, within SMa0738 at 396.711 kb on + strand, within SMa0738 at 396.712 kb on - strand, within SMa0738 at 396.712 kb on - strand, within SMa0738 at 396.773 kb on + strand, within SMa0738 at 396.836 kb on + strand at 396.837 kb on - strand at 396.837 kb on - strand at 396.960 kb on - strand at 397.101 kb on + strand, within SMa0739 at 397.162 kb on - strand, within SMa0739 at 397.165 kb on + strand, within SMa0739 at 397.311 kb on + strand, within SMa0739 at 397.311 kb on + strand, within SMa0739 at 397.312 kb on - strand, within SMa0739 at 397.312 kb on - strand, within SMa0739 at 397.364 kb on + strand at 397.364 kb on + strand at 397.365 kb on - strand at 397.477 kb on - strand at 397.513 kb on + strand at 397.514 kb on - strand at 397.529 kb on + strand at 397.544 kb on + strand at 397.557 kb on + strand at 397.558 kb on - strand at 397.558 kb on - strand at 397.592 kb on + strand at 397.670 kb on + strand at 397.921 kb on + strand, within SMa0740 at 397.978 kb on + strand, within SMa0740 at 398.008 kb on + strand at 398.009 kb on - strand at 398.107 kb on + strand at 398.270 kb on + strand, within SMa0742 at 398.271 kb on - strand, within SMa0742 at 398.271 kb on - strand, within SMa0742 at 398.328 kb on + strand, within SMa0742 at 398.329 kb on - strand, within SMa0742 at 398.346 kb on + strand, within SMa0742 at 398.347 kb on - strand, within SMa0742 at 398.347 kb on - strand, within SMa0742 at 398.386 kb on + strand, within SMa0742 at 398.389 kb on - strand, within SMa0742 at 398.417 kb on + strand, within SMa0742 at 398.431 kb on + strand, within SMa0742 at 398.432 kb on - strand, within SMa0742 at 398.457 kb on + strand, within SMa0742 at 398.457 kb on + strand, within SMa0742 at 398.458 kb on - strand, within SMa0742 at 398.458 kb on - strand, within SMa0742 at 398.496 kb on - strand, within SMa0742 at 398.546 kb on + strand, within SMa0742 at 398.547 kb on - strand, within SMa0742 at 398.594 kb on - strand at 398.594 kb on - strand at 398.639 kb on + strand at 398.640 kb on - strand at 398.736 kb on + strand at 398.737 kb on - strand at 398.737 kb on - strand at 398.918 kb on + strand at 398.918 kb on + strand at 398.919 kb on - strand at 398.919 kb on - strand at 398.977 kb on - strand at 399.028 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.4933903333 mM remove 396,711 + SMa0738 0.30 -0.6 396,711 + SMa0738 0.30 -0.9 396,712 - SMa0738 0.30 +0.1 396,712 - SMa0738 0.30 -0.4 396,773 + SMa0738 0.60 -2.4 396,836 + +0.4 396,837 - +0.2 396,837 - -0.0 396,960 - +0.0 397,101 + SMa0739 0.34 +0.5 397,162 - SMa0739 0.48 +0.0 397,165 + SMa0739 0.49 +0.1 397,311 + SMa0739 0.83 -0.1 397,311 + SMa0739 0.83 +0.0 397,312 - SMa0739 0.83 -0.4 397,312 - SMa0739 0.83 -0.3 397,364 + -0.9 397,364 + -0.6 397,365 - -0.5 397,477 - -1.7 397,513 + -0.2 397,514 - +0.5 397,529 + +2.0 397,544 + -0.4 397,557 + -1.7 397,558 - +0.1 397,558 - -0.2 397,592 + -0.5 397,670 + +0.4 397,921 + SMa0740 0.67 -2.0 397,978 + SMa0740 0.82 +0.2 398,008 + +1.0 398,009 - +0.3 398,107 + -0.1 398,270 + SMa0742 0.20 +0.2 398,271 - SMa0742 0.20 -0.4 398,271 - SMa0742 0.20 -0.8 398,328 + SMa0742 0.33 -0.5 398,329 - SMa0742 0.33 +0.4 398,346 + SMa0742 0.37 -0.2 398,347 - SMa0742 0.37 -0.1 398,347 - SMa0742 0.37 -0.1 398,386 + SMa0742 0.46 +0.3 398,389 - SMa0742 0.47 +1.3 398,417 + SMa0742 0.53 +0.1 398,431 + SMa0742 0.56 -0.6 398,432 - SMa0742 0.56 -0.1 398,457 + SMa0742 0.62 +0.5 398,457 + SMa0742 0.62 -0.4 398,458 - SMa0742 0.62 -0.2 398,458 - SMa0742 0.62 +0.2 398,496 - SMa0742 0.71 +0.4 398,546 + SMa0742 0.82 -0.0 398,547 - SMa0742 0.83 -0.4 398,594 - +0.9 398,594 - -0.1 398,639 + +1.0 398,640 - +0.2 398,736 + +0.6 398,737 - +1.0 398,737 - +0.7 398,918 + +2.0 398,918 + +0.3 398,919 - +0.0 398,919 - -0.1 398,977 - -0.6 399,028 - +0.2
Or see this region's nucleotide sequence