Experiment: 1-octen-3-ol 0.4933903333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02241 and SMc02242 are separated by 15 nucleotides SMc02242 and SMc02243 are separated by 2 nucleotides SMc02243 and SMc02244 are separated by 46 nucleotides
SMc02241: SMc02241 - hypothetical protein, at 605,288 to 606,226
SMc02241
SMc02242: SMc02242 - hypothetical protein, at 606,242 to 606,640
SMc02242
SMc02243: SMc02243 - hypothetical protein, at 606,643 to 607,146
SMc02243
SMc02244: SMc02244 - transmembrane protein, at 607,193 to 608,560
SMc02244
Position (kb) 606
607 Strain fitness (log2 ratio) -2
-1
0
1
2 at 605.261 kb on + strand at 605.407 kb on + strand, within SMc02241 at 605.408 kb on - strand, within SMc02241 at 605.553 kb on + strand, within SMc02241 at 605.553 kb on + strand, within SMc02241 at 605.554 kb on - strand, within SMc02241 at 605.554 kb on - strand, within SMc02241 at 605.554 kb on - strand, within SMc02241 at 605.554 kb on - strand, within SMc02241 at 605.664 kb on + strand, within SMc02241 at 605.695 kb on + strand, within SMc02241 at 605.892 kb on + strand, within SMc02241 at 605.893 kb on - strand, within SMc02241 at 605.893 kb on - strand, within SMc02241 at 605.916 kb on + strand, within SMc02241 at 605.917 kb on - strand, within SMc02241 at 605.947 kb on + strand, within SMc02241 at 606.010 kb on + strand, within SMc02241 at 606.011 kb on - strand, within SMc02241 at 606.061 kb on - strand, within SMc02241 at 606.278 kb on + strand at 606.343 kb on - strand, within SMc02242 at 606.343 kb on - strand, within SMc02242 at 606.343 kb on - strand, within SMc02242 at 606.388 kb on - strand, within SMc02242 at 606.497 kb on + strand, within SMc02242 at 606.498 kb on - strand, within SMc02242 at 606.498 kb on - strand, within SMc02242 at 606.501 kb on - strand, within SMc02242 at 606.569 kb on + strand, within SMc02242 at 606.794 kb on - strand, within SMc02243 at 606.913 kb on - strand, within SMc02243 at 606.934 kb on + strand, within SMc02243 at 607.016 kb on - strand, within SMc02243 at 607.016 kb on - strand, within SMc02243 at 607.016 kb on - strand, within SMc02243 at 607.027 kb on + strand, within SMc02243 at 607.120 kb on + strand at 607.120 kb on + strand at 607.166 kb on - strand at 607.181 kb on - strand at 607.267 kb on + strand at 607.268 kb on - strand at 607.268 kb on - strand at 607.466 kb on + strand, within SMc02244 at 607.467 kb on - strand, within SMc02244 at 607.467 kb on - strand, within SMc02244 at 607.552 kb on + strand, within SMc02244 at 607.552 kb on + strand, within SMc02244 at 607.553 kb on - strand, within SMc02244 at 607.553 kb on - strand, within SMc02244 at 607.553 kb on - strand, within SMc02244 at 607.553 kb on - strand, within SMc02244 at 607.553 kb on - strand, within SMc02244 at 607.554 kb on + strand, within SMc02244 at 607.554 kb on + strand, within SMc02244 at 607.555 kb on - strand, within SMc02244 at 607.628 kb on + strand, within SMc02244 at 607.628 kb on + strand, within SMc02244 at 607.628 kb on + strand, within SMc02244 at 607.629 kb on - strand, within SMc02244
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.4933903333 mM remove 605,261 + +0.6 605,407 + SMc02241 0.13 -0.6 605,408 - SMc02241 0.13 -0.4 605,553 + SMc02241 0.28 -0.2 605,553 + SMc02241 0.28 +0.1 605,554 - SMc02241 0.28 -0.4 605,554 - SMc02241 0.28 -0.4 605,554 - SMc02241 0.28 -0.7 605,554 - SMc02241 0.28 -1.8 605,664 + SMc02241 0.40 -0.1 605,695 + SMc02241 0.43 +2.2 605,892 + SMc02241 0.64 -0.8 605,893 - SMc02241 0.64 -0.3 605,893 - SMc02241 0.64 +0.2 605,916 + SMc02241 0.67 -0.2 605,917 - SMc02241 0.67 -0.1 605,947 + SMc02241 0.70 +0.4 606,010 + SMc02241 0.77 +0.5 606,011 - SMc02241 0.77 -0.4 606,061 - SMc02241 0.82 +0.6 606,278 + -0.5 606,343 - SMc02242 0.25 -0.4 606,343 - SMc02242 0.25 -0.4 606,343 - SMc02242 0.25 -1.0 606,388 - SMc02242 0.37 -0.1 606,497 + SMc02242 0.64 -0.5 606,498 - SMc02242 0.64 -0.7 606,498 - SMc02242 0.64 -0.6 606,501 - SMc02242 0.65 -1.1 606,569 + SMc02242 0.82 -0.3 606,794 - SMc02243 0.30 +0.0 606,913 - SMc02243 0.54 -0.9 606,934 + SMc02243 0.58 +1.5 607,016 - SMc02243 0.74 -0.4 607,016 - SMc02243 0.74 +0.9 607,016 - SMc02243 0.74 -0.8 607,027 + SMc02243 0.76 -0.9 607,120 + -0.9 607,120 + -0.4 607,166 - +0.3 607,181 - +0.2 607,267 + +0.2 607,268 - +0.6 607,268 - +0.3 607,466 + SMc02244 0.20 -0.0 607,467 - SMc02244 0.20 +0.1 607,467 - SMc02244 0.20 +0.1 607,552 + SMc02244 0.26 -0.9 607,552 + SMc02244 0.26 +0.8 607,553 - SMc02244 0.26 -0.1 607,553 - SMc02244 0.26 -0.4 607,553 - SMc02244 0.26 -0.3 607,553 - SMc02244 0.26 -0.3 607,553 - SMc02244 0.26 -0.5 607,554 + SMc02244 0.26 -0.4 607,554 + SMc02244 0.26 -0.6 607,555 - SMc02244 0.26 +0.1 607,628 + SMc02244 0.32 -0.3 607,628 + SMc02244 0.32 +1.0 607,628 + SMc02244 0.32 -1.0 607,629 - SMc02244 0.32 +0.9
Or see this region's nucleotide sequence