Experiment: 1-octen-3-ol 0.4933903333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1067 and SMa1070 are separated by 786 nucleotides SMa1070 and SMa1073 overlap by 31 nucleotides
SMa1067: SMa1067 - transcriptional regulator, at 583,446 to 584,192
SMa1067
SMa1070: SMa1070 - TRm23a transposase, at 584,979 to 586,571
SMa1070
SMa1073: SMa1073 - TRm23b IS ATP-binding protein, at 586,541 to 587,278
SMa1073
Position (kb) 584
585
586
587 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 584.016 kb on - strand, within SMa1067 at 584.075 kb on + strand, within SMa1067 at 584.076 kb on - strand, within SMa1067 at 584.115 kb on + strand, within SMa1067 at 584.116 kb on - strand, within SMa1067 at 584.116 kb on - strand, within SMa1067 at 584.116 kb on - strand, within SMa1067 at 584.116 kb on - strand, within SMa1067 at 584.121 kb on + strand at 584.122 kb on - strand at 584.191 kb on - strand at 584.266 kb on + strand at 584.266 kb on + strand at 584.408 kb on + strand at 584.467 kb on + strand at 584.467 kb on + strand at 584.468 kb on - strand at 584.481 kb on + strand at 584.684 kb on - strand at 584.802 kb on + strand at 584.802 kb on + strand at 585.270 kb on - strand, within SMa1070 at 585.298 kb on - strand, within SMa1070 at 585.670 kb on + strand, within SMa1070 at 585.702 kb on + strand, within SMa1070 at 585.703 kb on - strand, within SMa1070 at 585.774 kb on - strand, within SMa1070 at 585.774 kb on - strand, within SMa1070 at 585.820 kb on - strand, within SMa1070 at 585.822 kb on - strand, within SMa1070 at 585.875 kb on + strand, within SMa1070 at 585.875 kb on + strand, within SMa1070 at 585.875 kb on + strand, within SMa1070 at 585.966 kb on + strand, within SMa1070 at 586.009 kb on - strand, within SMa1070 at 586.121 kb on + strand, within SMa1070 at 587.131 kb on + strand, within SMa1073 at 587.408 kb on + strand at 587.408 kb on + strand at 587.408 kb on + strand at 587.408 kb on + strand at 587.408 kb on + strand at 587.408 kb on + strand at 587.409 kb on - strand at 587.409 kb on - strand at 587.409 kb on - strand at 587.409 kb on - strand at 587.409 kb on - strand at 587.532 kb on + strand at 587.549 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.4933903333 mM remove 584,016 - SMa1067 0.76 -0.3 584,075 + SMa1067 0.84 -0.8 584,076 - SMa1067 0.84 -0.3 584,115 + SMa1067 0.90 +1.0 584,116 - SMa1067 0.90 +0.4 584,116 - SMa1067 0.90 -0.6 584,116 - SMa1067 0.90 -1.0 584,116 - SMa1067 0.90 -1.6 584,121 + -0.5 584,122 - -0.1 584,191 - -0.1 584,266 + -0.7 584,266 + -0.1 584,408 + -0.0 584,467 + -0.9 584,467 + +0.1 584,468 - -1.7 584,481 + -1.1 584,684 - -0.9 584,802 + -0.2 584,802 + -0.1 585,270 - SMa1070 0.18 -1.0 585,298 - SMa1070 0.20 -0.4 585,670 + SMa1070 0.43 -0.8 585,702 + SMa1070 0.45 -0.3 585,703 - SMa1070 0.45 -1.0 585,774 - SMa1070 0.50 -0.2 585,774 - SMa1070 0.50 -0.0 585,820 - SMa1070 0.53 -0.8 585,822 - SMa1070 0.53 +0.6 585,875 + SMa1070 0.56 -1.2 585,875 + SMa1070 0.56 -0.5 585,875 + SMa1070 0.56 -2.1 585,966 + SMa1070 0.62 -0.9 586,009 - SMa1070 0.65 +0.7 586,121 + SMa1070 0.72 +0.7 587,131 + SMa1073 0.80 -0.5 587,408 + -0.1 587,408 + +0.1 587,408 + -0.1 587,408 + -0.0 587,408 + -0.7 587,408 + +0.7 587,409 - +0.4 587,409 - +0.7 587,409 - +0.4 587,409 - -1.3 587,409 - +0.9 587,532 + -0.3 587,549 - +3.6
Or see this region's nucleotide sequence