Strain Fitness in Sinorhizobium meliloti 1021 around SM_b21662

Experiment: 1-octen-3-ol 0.4933903333 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 nt SM_b21662: SM_b21662 - hypothetical protein, at 669,334 to 669,843 _b21662 Position (kb) 669 670Strain fitness (log2 ratio) -2 -1 0 1 2at 668.370 kb on + strandat 668.370 kb on + strandat 668.371 kb on - strandat 668.504 kb on + strandat 668.504 kb on + strandat 668.505 kb on - strandat 668.505 kb on - strandat 668.536 kb on - strandat 668.536 kb on - strandat 668.605 kb on + strandat 668.605 kb on + strandat 668.605 kb on + strandat 668.606 kb on - strandat 668.606 kb on - strandat 668.606 kb on - strandat 668.606 kb on - strandat 668.663 kb on - strandat 668.694 kb on - strandat 668.714 kb on - strandat 668.714 kb on - strandat 668.744 kb on - strandat 668.861 kb on + strandat 668.936 kb on + strandat 669.087 kb on + strandat 669.114 kb on - strandat 669.164 kb on + strandat 669.164 kb on + strandat 669.165 kb on - strandat 669.167 kb on - strandat 669.232 kb on + strandat 669.233 kb on - strandat 669.233 kb on - strandat 669.233 kb on - strandat 669.233 kb on - strandat 669.233 kb on - strandat 669.233 kb on - strandat 669.459 kb on + strand, within SM_b21662at 669.459 kb on + strand, within SM_b21662at 669.459 kb on + strand, within SM_b21662at 669.460 kb on - strand, within SM_b21662at 669.460 kb on - strand, within SM_b21662at 669.460 kb on - strand, within SM_b21662at 669.460 kb on - strand, within SM_b21662at 669.460 kb on - strand, within SM_b21662at 669.460 kb on - strand, within SM_b21662at 669.462 kb on - strand, within SM_b21662at 669.462 kb on - strand, within SM_b21662at 669.552 kb on + strand, within SM_b21662at 669.552 kb on + strand, within SM_b21662at 669.553 kb on - strand, within SM_b21662at 669.553 kb on - strand, within SM_b21662at 669.609 kb on + strand, within SM_b21662at 669.644 kb on + strand, within SM_b21662at 669.645 kb on - strand, within SM_b21662at 669.645 kb on - strand, within SM_b21662at 669.645 kb on - strand, within SM_b21662at 669.845 kb on + strandat 669.845 kb on + strandat 669.987 kb on - strandat 670.015 kb on + strandat 670.016 kb on - strandat 670.112 kb on + strandat 670.113 kb on - strandat 670.150 kb on + strandat 670.150 kb on + strandat 670.150 kb on + strandat 670.186 kb on + strandat 670.186 kb on + strandat 670.187 kb on - strandat 670.187 kb on - strandat 670.187 kb on - strandat 670.187 kb on - strandat 670.232 kb on + strandat 670.233 kb on - strandat 670.233 kb on - strandat 670.235 kb on + strandat 670.236 kb on - strandat 670.236 kb on - strandat 670.488 kb on + strandat 670.488 kb on + strandat 670.488 kb on + strandat 670.489 kb on - strandat 670.501 kb on + strandat 670.502 kb on - strandat 670.502 kb on - strandat 670.584 kb on - strandat 670.650 kb on + strandat 670.838 kb on + strandat 670.839 kb on - strandat 670.843 kb on + strandat 670.843 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.4933903333 mM
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668,370 + -0.1
668,370 + +0.3
668,371 - -0.3
668,504 + +0.6
668,504 + -1.3
668,505 - -0.3
668,505 - -1.1
668,536 - +0.4
668,536 - -0.1
668,605 + -0.1
668,605 + +0.0
668,605 + +0.8
668,606 - -0.6
668,606 - +0.2
668,606 - -1.0
668,606 - +0.2
668,663 - +0.9
668,694 - -1.1
668,714 - -0.5
668,714 - +1.3
668,744 - -0.5
668,861 + -0.4
668,936 + +0.2
669,087 + +0.0
669,114 - -0.0
669,164 + -0.4
669,164 + +2.2
669,165 - +1.9
669,167 - +0.8
669,232 + +2.4
669,233 - -0.4
669,233 - +0.1
669,233 - +0.2
669,233 - +0.3
669,233 - -0.4
669,233 - +0.0
669,459 + SM_b21662 0.25 +0.7
669,459 + SM_b21662 0.25 -0.1
669,459 + SM_b21662 0.25 -0.2
669,460 - SM_b21662 0.25 -0.1
669,460 - SM_b21662 0.25 +0.8
669,460 - SM_b21662 0.25 -0.6
669,460 - SM_b21662 0.25 -0.0
669,460 - SM_b21662 0.25 -2.0
669,460 - SM_b21662 0.25 -0.3
669,462 - SM_b21662 0.25 +0.1
669,462 - SM_b21662 0.25 -0.2
669,552 + SM_b21662 0.43 -0.6
669,552 + SM_b21662 0.43 +0.3
669,553 - SM_b21662 0.43 -0.5
669,553 - SM_b21662 0.43 +0.3
669,609 + SM_b21662 0.54 +0.4
669,644 + SM_b21662 0.61 -0.3
669,645 - SM_b21662 0.61 +0.2
669,645 - SM_b21662 0.61 +0.8
669,645 - SM_b21662 0.61 +0.3
669,845 + +1.9
669,845 + -0.3
669,987 - +0.4
670,015 + -0.5
670,016 - +0.1
670,112 + -0.4
670,113 - +0.3
670,150 + +1.3
670,150 + +0.1
670,150 + +1.1
670,186 + +0.3
670,186 + +0.9
670,187 - +0.0
670,187 - +0.4
670,187 - -0.7
670,187 - +0.4
670,232 + +0.1
670,233 - -0.3
670,233 - +0.1
670,235 + -0.5
670,236 - +0.2
670,236 - -0.4
670,488 + +0.6
670,488 + +0.2
670,488 + +0.0
670,489 - +0.6
670,501 + +0.5
670,502 - +0.1
670,502 - +0.7
670,584 - -1.1
670,650 + -0.2
670,838 + -0.3
670,839 - -0.1
670,843 + -0.4
670,843 + -0.4

Or see this region's nucleotide sequence