Experiment: 1-octen-3-ol 0.4933903333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc04154 and SMc04153 are separated by 275 nucleotides SMc04153 and SMc04152 are separated by 10 nucleotides SMc04152 and SMc04151 overlap by 4 nucleotides
SMc04154: SMc04154 - formyltetrahydrofolate deformylase, at 112,737 to 113,627
SMc04154
SMc04153: SMc04153 - aminomethyltransferase, at 113,903 to 114,958
SMc04153
SMc04152: SMc04152 - hypothetical protein, at 114,969 to 115,574
SMc04152
SMc04151: SMc04151 - ferredoxin protein, at 115,571 to 116,536
SMc04151
Position (kb)
113
114
115 Strain fitness (log2 ratio)
-1
0
1 at 113.654 kb on - strand at 113.832 kb on + strand at 114.038 kb on + strand, within SMc04153 at 114.038 kb on + strand, within SMc04153 at 114.039 kb on - strand, within SMc04153 at 114.039 kb on - strand, within SMc04153 at 114.063 kb on - strand, within SMc04153 at 114.086 kb on + strand, within SMc04153 at 114.086 kb on + strand, within SMc04153 at 114.087 kb on - strand, within SMc04153 at 114.287 kb on + strand, within SMc04153 at 114.300 kb on - strand, within SMc04153 at 114.387 kb on - strand, within SMc04153 at 114.388 kb on + strand, within SMc04153 at 114.528 kb on - strand, within SMc04153 at 114.539 kb on + strand, within SMc04153 at 114.545 kb on + strand, within SMc04153 at 114.545 kb on + strand, within SMc04153 at 114.545 kb on + strand, within SMc04153 at 114.563 kb on + strand, within SMc04153 at 114.563 kb on + strand, within SMc04153 at 114.564 kb on - strand, within SMc04153 at 114.564 kb on - strand, within SMc04153 at 114.564 kb on - strand, within SMc04153 at 114.792 kb on - strand, within SMc04153 at 114.957 kb on - strand at 114.986 kb on + strand at 114.987 kb on - strand at 115.003 kb on - strand at 115.131 kb on + strand, within SMc04152 at 115.131 kb on + strand, within SMc04152 at 115.132 kb on - strand, within SMc04152 at 115.132 kb on - strand, within SMc04152 at 115.262 kb on + strand, within SMc04152 at 115.278 kb on + strand, within SMc04152 at 115.278 kb on + strand, within SMc04152 at 115.279 kb on - strand, within SMc04152 at 115.280 kb on + strand, within SMc04152 at 115.474 kb on + strand, within SMc04152 at 115.677 kb on - strand, within SMc04151 at 115.763 kb on + strand, within SMc04151 at 115.763 kb on + strand, within SMc04151 at 115.764 kb on - strand, within SMc04151
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.4933903333 mM remove 113,654 - +0.6 113,832 + -0.4 114,038 + SMc04153 0.13 -0.7 114,038 + SMc04153 0.13 -0.2 114,039 - SMc04153 0.13 +0.1 114,039 - SMc04153 0.13 -0.6 114,063 - SMc04153 0.15 +0.3 114,086 + SMc04153 0.17 -0.9 114,086 + SMc04153 0.17 -0.2 114,087 - SMc04153 0.17 -0.2 114,287 + SMc04153 0.36 -0.3 114,300 - SMc04153 0.38 +0.1 114,387 - SMc04153 0.46 -1.2 114,388 + SMc04153 0.46 -0.1 114,528 - SMc04153 0.59 -0.1 114,539 + SMc04153 0.60 +0.5 114,545 + SMc04153 0.61 +0.2 114,545 + SMc04153 0.61 -0.2 114,545 + SMc04153 0.61 -0.2 114,563 + SMc04153 0.62 -1.2 114,563 + SMc04153 0.62 -0.2 114,564 - SMc04153 0.63 -1.6 114,564 - SMc04153 0.63 -0.9 114,564 - SMc04153 0.63 -1.0 114,792 - SMc04153 0.84 +0.0 114,957 - -1.6 114,986 + +0.7 114,987 - -0.7 115,003 - +0.6 115,131 + SMc04152 0.27 +0.3 115,131 + SMc04152 0.27 -0.2 115,132 - SMc04152 0.27 +0.5 115,132 - SMc04152 0.27 +0.6 115,262 + SMc04152 0.48 -0.4 115,278 + SMc04152 0.51 +0.3 115,278 + SMc04152 0.51 +0.4 115,279 - SMc04152 0.51 +0.1 115,280 + SMc04152 0.51 -0.3 115,474 + SMc04152 0.83 -0.1 115,677 - SMc04151 0.11 +0.2 115,763 + SMc04151 0.20 -0.2 115,763 + SMc04151 0.20 -0.2 115,764 - SMc04151 0.20 -0.1
Or see this region's nucleotide sequence