Experiment: 1-octen-3-ol 0.4933903333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0849 and SMa0850 are separated by 301 nucleotides SMa0850 and SMa0851 are separated by 133 nucleotides
SMa0849: SMa0849 - SyrM transcriptional regulator, at 466,418 to 467,398
SMa0849
SMa0850: SMa0850 - hypothetical protein, at 467,700 to 468,065
SMa0850
SMa0851: SMa0851 - NodH sulfotransferase, at 468,199 to 468,942
SMa0851
Position (kb)
467
468
469 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 466.723 kb on - strand, within SMa0849 at 466.909 kb on - strand, within SMa0849 at 467.176 kb on - strand, within SMa0849 at 467.223 kb on + strand, within SMa0849 at 467.303 kb on + strand at 467.434 kb on + strand at 467.434 kb on + strand at 467.435 kb on - strand at 467.464 kb on - strand at 467.648 kb on - strand at 467.655 kb on + strand at 467.733 kb on - strand at 467.754 kb on - strand, within SMa0850 at 467.813 kb on + strand, within SMa0850 at 467.814 kb on - strand, within SMa0850 at 467.814 kb on - strand, within SMa0850 at 467.814 kb on - strand, within SMa0850 at 467.879 kb on + strand, within SMa0850 at 467.879 kb on + strand, within SMa0850 at 467.947 kb on + strand, within SMa0850 at 468.044 kb on + strand at 468.133 kb on + strand at 468.230 kb on + strand at 468.621 kb on + strand, within SMa0851 at 468.627 kb on + strand, within SMa0851 at 468.627 kb on + strand, within SMa0851 at 468.628 kb on - strand, within SMa0851 at 468.793 kb on - strand, within SMa0851 at 468.813 kb on - strand, within SMa0851 at 468.960 kb on + strand at 468.990 kb on - strand at 469.012 kb on - strand at 469.012 kb on - strand at 469.034 kb on + strand at 469.049 kb on + strand at 469.049 kb on + strand at 469.050 kb on - strand at 469.055 kb on + strand at 469.055 kb on + strand at 469.056 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.4933903333 mM remove 466,723 - SMa0849 0.31 -0.4 466,909 - SMa0849 0.50 -0.2 467,176 - SMa0849 0.77 -0.1 467,223 + SMa0849 0.82 -0.0 467,303 + +0.1 467,434 + +0.3 467,434 + +1.0 467,435 - -0.6 467,464 - +0.5 467,648 - +1.9 467,655 + -0.1 467,733 - +0.2 467,754 - SMa0850 0.15 -0.6 467,813 + SMa0850 0.31 -0.3 467,814 - SMa0850 0.31 +0.4 467,814 - SMa0850 0.31 -0.7 467,814 - SMa0850 0.31 -1.3 467,879 + SMa0850 0.49 -0.8 467,879 + SMa0850 0.49 -0.4 467,947 + SMa0850 0.67 +0.9 468,044 + -0.1 468,133 + +0.5 468,230 + +1.0 468,621 + SMa0851 0.57 -0.1 468,627 + SMa0851 0.58 +1.3 468,627 + SMa0851 0.58 +1.1 468,628 - SMa0851 0.58 +1.1 468,793 - SMa0851 0.80 -2.9 468,813 - SMa0851 0.83 -0.9 468,960 + +0.7 468,990 - -0.1 469,012 - -0.1 469,012 - +0.6 469,034 + -1.7 469,049 + +0.3 469,049 + -0.4 469,050 - +1.9 469,055 + +0.7 469,055 + +0.7 469,056 - +0.4
Or see this region's nucleotide sequence