Experiment: 1-octen-3-ol 0.5427293333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa2034 and SMa2037 are separated by 9 nucleotides SMa2037 and SMa5011 are separated by 2 nucleotides SMa5011 and SMa2041 overlap by 1 nucleotides
SMa2034: SMa2034 - hypothetical protein, at 1,151,643 to 1,151,888
SMa2034
SMa2037: SMa2037 - Oxidoreductase, at 1,151,898 to 1,154,150
SMa2037
SMa5011: SMa5011 - oxidoreductase, at 1,154,153 to 1,154,629
SMa5011
SMa2041: SMa2041 - oxidoreductase, at 1,154,629 to 1,155,489
SMa2041
Position (kb)
1151
1152
1153
1154
1155 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1151.077 kb on + strand at 1151.106 kb on - strand at 1151.279 kb on + strand at 1151.371 kb on - strand at 1151.376 kb on + strand at 1151.376 kb on + strand at 1151.454 kb on + strand at 1151.508 kb on - strand at 1151.509 kb on + strand at 1151.619 kb on - strand at 1151.717 kb on - strand, within SMa2034 at 1151.811 kb on - strand, within SMa2034 at 1151.884 kb on - strand at 1151.900 kb on - strand at 1151.942 kb on + strand at 1152.079 kb on - strand at 1152.079 kb on - strand at 1152.083 kb on + strand at 1152.083 kb on + strand at 1152.084 kb on - strand at 1152.154 kb on + strand, within SMa2037 at 1152.158 kb on + strand, within SMa2037 at 1152.158 kb on + strand, within SMa2037 at 1152.158 kb on + strand, within SMa2037 at 1152.159 kb on - strand, within SMa2037 at 1152.159 kb on - strand, within SMa2037 at 1152.159 kb on - strand, within SMa2037 at 1152.160 kb on + strand, within SMa2037 at 1152.160 kb on + strand, within SMa2037 at 1152.161 kb on - strand, within SMa2037 at 1152.161 kb on - strand, within SMa2037 at 1152.161 kb on - strand, within SMa2037 at 1152.208 kb on + strand, within SMa2037 at 1152.209 kb on - strand, within SMa2037 at 1152.266 kb on - strand, within SMa2037 at 1152.317 kb on + strand, within SMa2037 at 1152.318 kb on - strand, within SMa2037 at 1152.536 kb on + strand, within SMa2037 at 1152.537 kb on - strand, within SMa2037 at 1152.913 kb on + strand, within SMa2037 at 1153.046 kb on - strand, within SMa2037 at 1153.081 kb on + strand, within SMa2037 at 1153.081 kb on + strand, within SMa2037 at 1153.081 kb on + strand, within SMa2037 at 1153.111 kb on + strand, within SMa2037 at 1153.160 kb on - strand, within SMa2037 at 1153.476 kb on + strand, within SMa2037 at 1153.476 kb on + strand, within SMa2037 at 1153.531 kb on + strand, within SMa2037 at 1153.531 kb on + strand, within SMa2037 at 1153.532 kb on - strand, within SMa2037 at 1153.532 kb on - strand, within SMa2037 at 1153.532 kb on - strand, within SMa2037 at 1153.532 kb on - strand, within SMa2037 at 1153.754 kb on - strand, within SMa2037 at 1153.754 kb on - strand, within SMa2037 at 1153.754 kb on - strand, within SMa2037 at 1153.834 kb on + strand, within SMa2037 at 1153.834 kb on + strand, within SMa2037 at 1153.877 kb on - strand, within SMa2037 at 1153.877 kb on - strand, within SMa2037 at 1153.877 kb on - strand, within SMa2037 at 1154.067 kb on + strand at 1154.072 kb on + strand at 1154.073 kb on - strand at 1154.249 kb on + strand, within SMa5011 at 1154.250 kb on - strand, within SMa5011 at 1154.596 kb on + strand at 1154.597 kb on - strand at 1154.597 kb on - strand at 1154.597 kb on - strand at 1154.618 kb on + strand at 1154.618 kb on + strand at 1154.729 kb on - strand, within SMa2041 at 1154.729 kb on - strand, within SMa2041 at 1154.957 kb on + strand, within SMa2041 at 1154.957 kb on + strand, within SMa2041
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.5427293333 mM remove 1,151,077 + -1.2 1,151,106 - +0.2 1,151,279 + -0.8 1,151,371 - +0.1 1,151,376 + -0.7 1,151,376 + -1.3 1,151,454 + -0.4 1,151,508 - +0.0 1,151,509 + +0.5 1,151,619 - -0.1 1,151,717 - SMa2034 0.30 -1.5 1,151,811 - SMa2034 0.68 +1.9 1,151,884 - -0.3 1,151,900 - -0.2 1,151,942 + -0.3 1,152,079 - -0.1 1,152,079 - -0.6 1,152,083 + -0.8 1,152,083 + -1.2 1,152,084 - +0.7 1,152,154 + SMa2037 0.11 -0.9 1,152,158 + SMa2037 0.12 -1.5 1,152,158 + SMa2037 0.12 -0.5 1,152,158 + SMa2037 0.12 -1.4 1,152,159 - SMa2037 0.12 +1.3 1,152,159 - SMa2037 0.12 +0.5 1,152,159 - SMa2037 0.12 -0.5 1,152,160 + SMa2037 0.12 +0.3 1,152,160 + SMa2037 0.12 +0.1 1,152,161 - SMa2037 0.12 -0.5 1,152,161 - SMa2037 0.12 -1.4 1,152,161 - SMa2037 0.12 +1.6 1,152,208 + SMa2037 0.14 -0.8 1,152,209 - SMa2037 0.14 +0.2 1,152,266 - SMa2037 0.16 +0.9 1,152,317 + SMa2037 0.19 -0.9 1,152,318 - SMa2037 0.19 -0.1 1,152,536 + SMa2037 0.28 -0.2 1,152,537 - SMa2037 0.28 -2.2 1,152,913 + SMa2037 0.45 +0.8 1,153,046 - SMa2037 0.51 +0.4 1,153,081 + SMa2037 0.53 +0.3 1,153,081 + SMa2037 0.53 +0.3 1,153,081 + SMa2037 0.53 +0.9 1,153,111 + SMa2037 0.54 +0.2 1,153,160 - SMa2037 0.56 -1.1 1,153,476 + SMa2037 0.70 +1.0 1,153,476 + SMa2037 0.70 -0.9 1,153,531 + SMa2037 0.72 +0.9 1,153,531 + SMa2037 0.72 -1.0 1,153,532 - SMa2037 0.73 +0.0 1,153,532 - SMa2037 0.73 -0.5 1,153,532 - SMa2037 0.73 +0.3 1,153,532 - SMa2037 0.73 -0.3 1,153,754 - SMa2037 0.82 +0.9 1,153,754 - SMa2037 0.82 -0.9 1,153,754 - SMa2037 0.82 -1.1 1,153,834 + SMa2037 0.86 -0.9 1,153,834 + SMa2037 0.86 +0.6 1,153,877 - SMa2037 0.88 -0.1 1,153,877 - SMa2037 0.88 -0.9 1,153,877 - SMa2037 0.88 +0.1 1,154,067 + -0.4 1,154,072 + +0.2 1,154,073 - -0.3 1,154,249 + SMa5011 0.20 +0.5 1,154,250 - SMa5011 0.20 +1.9 1,154,596 + -1.4 1,154,597 - +0.6 1,154,597 - -0.1 1,154,597 - -0.4 1,154,618 + +0.1 1,154,618 + -0.7 1,154,729 - SMa2041 0.12 -0.1 1,154,729 - SMa2041 0.12 +0.4 1,154,957 + SMa2041 0.38 -0.1 1,154,957 + SMa2041 0.38 +0.5
Or see this region's nucleotide sequence