Strain Fitness in Sinorhizobium meliloti 1021 around SM_b21166

Experiment: 1-octen-3-ol 0.5427293333 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSM_b21165 and SM_b21166 overlap by 4 nucleotidesSM_b21166 and SM_b21167 are separated by 34 nucleotides SM_b21165: SM_b21165 - Histidine ammonia-lyase (EC 4.3.1.3) (from data), at 910,662 to 912,197 _b21165 SM_b21166: SM_b21166 - Imidazolonepropionase (EC 3.5.2.7) (from data), at 912,194 to 913,609 _b21166 SM_b21167: SM_b21167 - reverse transcriptasematurase, at 913,644 to 915,005 _b21167 Position (kb) 912 913 914Strain fitness (log2 ratio) -2 -1 0 1 2at 911.359 kb on + strand, within SM_b21165at 911.359 kb on + strand, within SM_b21165at 911.359 kb on + strand, within SM_b21165at 911.360 kb on - strand, within SM_b21165at 911.360 kb on - strand, within SM_b21165at 911.459 kb on + strand, within SM_b21165at 911.744 kb on + strand, within SM_b21165at 911.745 kb on - strand, within SM_b21165at 911.745 kb on - strand, within SM_b21165at 911.938 kb on - strand, within SM_b21165at 912.040 kb on + strand, within SM_b21165at 912.142 kb on + strandat 912.142 kb on + strandat 912.143 kb on - strandat 912.255 kb on + strandat 912.543 kb on + strand, within SM_b21166at 912.616 kb on - strand, within SM_b21166at 912.645 kb on + strand, within SM_b21166at 912.850 kb on - strand, within SM_b21166at 912.900 kb on + strand, within SM_b21166at 912.900 kb on + strand, within SM_b21166at 912.998 kb on - strand, within SM_b21166at 913.137 kb on + strand, within SM_b21166at 913.138 kb on - strand, within SM_b21166at 913.195 kb on + strand, within SM_b21166at 913.195 kb on + strand, within SM_b21166at 913.441 kb on + strand, within SM_b21166at 913.442 kb on - strand, within SM_b21166at 913.478 kb on - strandat 913.478 kb on - strandat 913.517 kb on + strandat 914.503 kb on + strand, within SM_b21167at 914.503 kb on + strand, within SM_b21167at 914.503 kb on + strand, within SM_b21167at 914.504 kb on + strand, within SM_b21167at 914.504 kb on - strand, within SM_b21167at 914.504 kb on - strand, within SM_b21167

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Per-strain Table

Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.5427293333 mM
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911,359 + SM_b21165 0.45 +0.4
911,359 + SM_b21165 0.45 -1.1
911,359 + SM_b21165 0.45 +0.1
911,360 - SM_b21165 0.45 +0.2
911,360 - SM_b21165 0.45 -0.0
911,459 + SM_b21165 0.52 +0.2
911,744 + SM_b21165 0.70 +1.8
911,745 - SM_b21165 0.71 +0.1
911,745 - SM_b21165 0.71 +0.1
911,938 - SM_b21165 0.83 +0.0
912,040 + SM_b21165 0.90 +0.4
912,142 + -1.0
912,142 + -0.9
912,143 - +1.0
912,255 + -0.3
912,543 + SM_b21166 0.25 +0.0
912,616 - SM_b21166 0.30 -0.1
912,645 + SM_b21166 0.32 +0.2
912,850 - SM_b21166 0.46 -0.2
912,900 + SM_b21166 0.50 -1.8
912,900 + SM_b21166 0.50 -0.4
912,998 - SM_b21166 0.57 -0.2
913,137 + SM_b21166 0.67 +0.5
913,138 - SM_b21166 0.67 +1.1
913,195 + SM_b21166 0.71 +0.8
913,195 + SM_b21166 0.71 -0.0
913,441 + SM_b21166 0.88 +0.1
913,442 - SM_b21166 0.88 -0.1
913,478 - +0.4
913,478 - +0.0
913,517 + -1.0
914,503 + SM_b21167 0.63 +0.6
914,503 + SM_b21167 0.63 -0.4
914,503 + SM_b21167 0.63 -0.2
914,504 + SM_b21167 0.63 -0.2
914,504 - SM_b21167 0.63 +1.0
914,504 - SM_b21167 0.63 +0.5

Or see this region's nucleotide sequence