Experiment: 1-octen-3-ol 0.5427293333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1643 and SMa1644 are separated by 97 nucleotides SMa1644 and SMa5010 are separated by 177 nucleotides SMa5010 and SMa1646 are separated by 363 nucleotides
SMa1643: SMa1643 - hypothetical protein, at 915,332 to 915,670
SMa1643
SMa1644: SMa1644 - ABC transporter permease, at 915,768 to 916,487
SMa1644
SMa5010: SMa5010 - hypothetical protein, at 916,665 to 917,003
SMa5010
SMa1646: SMa1646 - ABC transporter ATP-binding protein, at 917,367 to 918,389
SMa1646
Position (kb) 916
917
918 Strain fitness (log2 ratio) -1
0
1
2
3 at 915.726 kb on - strand at 915.804 kb on + strand at 915.805 kb on - strand at 915.825 kb on - strand at 915.825 kb on - strand at 915.945 kb on + strand, within SMa1644 at 915.945 kb on + strand, within SMa1644 at 915.946 kb on - strand, within SMa1644 at 916.034 kb on - strand, within SMa1644 at 916.064 kb on + strand, within SMa1644 at 916.065 kb on - strand, within SMa1644 at 916.065 kb on - strand, within SMa1644 at 916.451 kb on - strand at 916.453 kb on + strand at 916.454 kb on - strand at 916.454 kb on - strand at 916.571 kb on - strand at 916.678 kb on - strand at 916.687 kb on + strand at 916.724 kb on - strand, within SMa5010 at 916.879 kb on - strand, within SMa5010 at 917.001 kb on + strand at 917.002 kb on - strand at 917.002 kb on - strand at 917.005 kb on + strand at 917.027 kb on + strand at 917.028 kb on - strand at 917.065 kb on - strand at 917.133 kb on + strand at 917.171 kb on + strand at 917.233 kb on + strand at 917.324 kb on - strand at 917.325 kb on + strand at 917.325 kb on + strand at 917.362 kb on + strand at 917.363 kb on - strand at 917.368 kb on + strand at 917.369 kb on - strand at 917.454 kb on - strand at 917.454 kb on - strand at 917.565 kb on + strand, within SMa1646 at 917.566 kb on - strand, within SMa1646 at 917.566 kb on - strand, within SMa1646 at 917.660 kb on + strand, within SMa1646 at 917.660 kb on + strand, within SMa1646 at 917.660 kb on + strand, within SMa1646 at 917.713 kb on + strand, within SMa1646 at 917.713 kb on + strand, within SMa1646 at 917.713 kb on + strand, within SMa1646 at 917.714 kb on - strand, within SMa1646 at 917.714 kb on - strand, within SMa1646 at 917.722 kb on + strand, within SMa1646 at 917.723 kb on - strand, within SMa1646 at 917.839 kb on - strand, within SMa1646
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.5427293333 mM remove 915,726 - +0.5 915,804 + +0.7 915,805 - -0.1 915,825 - -0.3 915,825 - +1.0 915,945 + SMa1644 0.25 -0.7 915,945 + SMa1644 0.25 +0.8 915,946 - SMa1644 0.25 +0.1 916,034 - SMa1644 0.37 +0.4 916,064 + SMa1644 0.41 -0.7 916,065 - SMa1644 0.41 +0.3 916,065 - SMa1644 0.41 +2.0 916,451 - +3.0 916,453 + -0.1 916,454 - +0.8 916,454 - -0.5 916,571 - +0.3 916,678 - -0.4 916,687 + -0.6 916,724 - SMa5010 0.17 +0.8 916,879 - SMa5010 0.63 +0.8 917,001 + +0.7 917,002 - +1.9 917,002 - -0.4 917,005 + -1.0 917,027 + +2.4 917,028 - +2.0 917,065 - +0.2 917,133 + -0.1 917,171 + +0.4 917,233 + +0.7 917,324 - +0.9 917,325 + -0.3 917,325 + -0.6 917,362 + +0.0 917,363 - -0.5 917,368 + -0.0 917,369 - +0.1 917,454 - -0.5 917,454 - -0.1 917,565 + SMa1646 0.19 +0.0 917,566 - SMa1646 0.19 +0.0 917,566 - SMa1646 0.19 +0.1 917,660 + SMa1646 0.29 -0.4 917,660 + SMa1646 0.29 +0.0 917,660 + SMa1646 0.29 -0.3 917,713 + SMa1646 0.34 +1.0 917,713 + SMa1646 0.34 -1.4 917,713 + SMa1646 0.34 -0.0 917,714 - SMa1646 0.34 +0.7 917,714 - SMa1646 0.34 -0.0 917,722 + SMa1646 0.35 -0.0 917,723 - SMa1646 0.35 +0.3 917,839 - SMa1646 0.46 +1.1
Or see this region's nucleotide sequence