Experiment: 1-octen-3-ol 0.5427293333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0574 and SMa0575 are separated by 50 nucleotides SMa0575 and SMa0576 are separated by 68 nucleotides SMa0576 and SMa0579 are separated by 190 nucleotides
SMa0574: SMa0574 - hypothetical protein, at 305,128 to 305,841
SMa0574
SMa0575: SMa0575 - hypothetical protein, at 305,892 to 306,179
SMa0575
SMa0576: SMa0576 - Leu or Leu/Val/Ile transport binding protein, at 306,248 to 307,339
SMa0576
SMa0579: SMa0579 - guanylate cyclase, at 307,530 to 309,989
SMa0579
Position (kb) 306
307
308 Strain fitness (log2 ratio) -1
0
1
2 at 305.291 kb on - strand, within SMa0574 at 305.305 kb on + strand, within SMa0574 at 305.305 kb on + strand, within SMa0574 at 305.306 kb on - strand, within SMa0574 at 305.541 kb on - strand, within SMa0574 at 305.600 kb on - strand, within SMa0574 at 305.600 kb on - strand, within SMa0574 at 305.657 kb on + strand, within SMa0574 at 305.658 kb on - strand, within SMa0574 at 305.713 kb on + strand, within SMa0574 at 305.713 kb on + strand, within SMa0574 at 305.713 kb on + strand, within SMa0574 at 305.714 kb on - strand, within SMa0574 at 305.714 kb on - strand, within SMa0574 at 305.714 kb on - strand, within SMa0574 at 305.798 kb on + strand at 305.806 kb on - strand at 305.869 kb on + strand at 305.869 kb on + strand at 305.869 kb on + strand at 305.870 kb on - strand at 305.870 kb on - strand at 306.026 kb on + strand, within SMa0575 at 306.026 kb on + strand, within SMa0575 at 306.215 kb on + strand at 306.370 kb on + strand, within SMa0576 at 306.401 kb on - strand, within SMa0576 at 306.401 kb on - strand, within SMa0576 at 306.533 kb on + strand, within SMa0576 at 306.533 kb on + strand, within SMa0576 at 306.569 kb on + strand, within SMa0576 at 306.569 kb on + strand, within SMa0576 at 306.570 kb on - strand, within SMa0576 at 306.696 kb on - strand, within SMa0576 at 306.819 kb on - strand, within SMa0576 at 306.827 kb on + strand, within SMa0576 at 306.884 kb on - strand, within SMa0576 at 306.909 kb on - strand, within SMa0576 at 306.928 kb on + strand, within SMa0576 at 306.928 kb on + strand, within SMa0576 at 306.929 kb on - strand, within SMa0576 at 307.009 kb on + strand, within SMa0576 at 307.142 kb on + strand, within SMa0576 at 307.143 kb on - strand, within SMa0576 at 307.209 kb on + strand, within SMa0576 at 307.297 kb on - strand at 307.300 kb on + strand at 307.301 kb on + strand at 307.302 kb on - strand at 307.302 kb on - strand at 307.302 kb on - strand at 307.338 kb on - strand at 307.354 kb on + strand at 307.442 kb on - strand at 307.610 kb on - strand at 307.620 kb on + strand at 307.620 kb on + strand at 307.621 kb on - strand at 307.621 kb on - strand at 307.621 kb on - strand at 307.658 kb on - strand at 307.658 kb on - strand at 307.819 kb on + strand, within SMa0579 at 307.819 kb on + strand, within SMa0579 at 307.819 kb on + strand, within SMa0579 at 307.819 kb on + strand, within SMa0579 at 307.819 kb on + strand, within SMa0579 at 307.819 kb on + strand, within SMa0579 at 307.820 kb on - strand, within SMa0579 at 307.820 kb on - strand, within SMa0579 at 307.820 kb on - strand, within SMa0579 at 307.831 kb on + strand, within SMa0579
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.5427293333 mM remove 305,291 - SMa0574 0.23 +0.4 305,305 + SMa0574 0.25 +0.2 305,305 + SMa0574 0.25 +0.1 305,306 - SMa0574 0.25 +0.4 305,541 - SMa0574 0.58 +1.3 305,600 - SMa0574 0.66 +0.1 305,600 - SMa0574 0.66 -0.9 305,657 + SMa0574 0.74 -0.3 305,658 - SMa0574 0.74 +0.6 305,713 + SMa0574 0.82 +1.1 305,713 + SMa0574 0.82 +0.0 305,713 + SMa0574 0.82 -0.1 305,714 - SMa0574 0.82 -0.1 305,714 - SMa0574 0.82 +0.9 305,714 - SMa0574 0.82 +2.0 305,798 + -0.6 305,806 - +0.2 305,869 + -0.1 305,869 + -0.2 305,869 + +0.2 305,870 - -0.6 305,870 - -0.5 306,026 + SMa0575 0.47 -0.6 306,026 + SMa0575 0.47 +0.2 306,215 + -0.5 306,370 + SMa0576 0.11 +0.3 306,401 - SMa0576 0.14 +0.2 306,401 - SMa0576 0.14 +0.9 306,533 + SMa0576 0.26 +0.5 306,533 + SMa0576 0.26 -0.0 306,569 + SMa0576 0.29 +0.1 306,569 + SMa0576 0.29 -0.1 306,570 - SMa0576 0.29 +0.1 306,696 - SMa0576 0.41 -0.3 306,819 - SMa0576 0.52 +0.1 306,827 + SMa0576 0.53 +0.4 306,884 - SMa0576 0.58 +0.4 306,909 - SMa0576 0.61 +0.5 306,928 + SMa0576 0.62 +0.6 306,928 + SMa0576 0.62 +0.4 306,929 - SMa0576 0.62 +0.2 307,009 + SMa0576 0.70 +0.5 307,142 + SMa0576 0.82 +0.8 307,143 - SMa0576 0.82 -0.7 307,209 + SMa0576 0.88 -0.1 307,297 - -0.8 307,300 + +0.4 307,301 + -1.6 307,302 - +1.2 307,302 - +0.4 307,302 - +0.2 307,338 - +0.7 307,354 + -1.1 307,442 - -1.1 307,610 - -1.0 307,620 + -0.2 307,620 + -0.0 307,621 - +0.0 307,621 - +0.9 307,621 - -0.1 307,658 - +0.3 307,658 - -1.3 307,819 + SMa0579 0.12 -1.3 307,819 + SMa0579 0.12 +0.5 307,819 + SMa0579 0.12 -1.1 307,819 + SMa0579 0.12 -0.2 307,819 + SMa0579 0.12 +0.2 307,819 + SMa0579 0.12 -0.5 307,820 - SMa0579 0.12 -0.1 307,820 - SMa0579 0.12 -0.5 307,820 - SMa0579 0.12 +0.2 307,831 + SMa0579 0.12 +1.0
Or see this region's nucleotide sequence