Experiment: 1-octen-3-ol 0.6030326667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1831 and SMa1832 are separated by 63 nucleotides SMa1832 and SMa1833 are separated by 42 nucleotides
SMa1831: SMa1831 - hypothetical protein, at 1,038,347 to 1,038,949
SMa1831
SMa1832: SMa1832 - hypothetical protein, at 1,039,013 to 1,039,465
SMa1832
SMa1833: SMa1833 - hypothetical protein, at 1,039,508 to 1,040,893
SMa1833
Position (kb)
1039
1040 Strain fitness (log2 ratio)
-1
0
1
2 at 1038.105 kb on - strand at 1038.105 kb on - strand at 1038.127 kb on + strand at 1038.142 kb on + strand at 1038.375 kb on + strand at 1038.485 kb on - strand, within SMa1831 at 1038.554 kb on + strand, within SMa1831 at 1038.885 kb on - strand, within SMa1831 at 1038.885 kb on - strand, within SMa1831 at 1038.885 kb on - strand, within SMa1831 at 1038.948 kb on - strand at 1038.961 kb on + strand at 1039.007 kb on + strand at 1039.008 kb on - strand at 1039.009 kb on + strand at 1039.009 kb on + strand at 1039.010 kb on - strand at 1039.119 kb on + strand, within SMa1832 at 1039.148 kb on + strand, within SMa1832 at 1039.266 kb on - strand, within SMa1832 at 1039.314 kb on + strand, within SMa1832 at 1039.314 kb on + strand, within SMa1832 at 1039.315 kb on - strand, within SMa1832 at 1039.315 kb on - strand, within SMa1832 at 1039.526 kb on - strand at 1039.531 kb on + strand at 1039.532 kb on - strand at 1039.572 kb on + strand at 1039.573 kb on - strand at 1039.597 kb on + strand at 1039.597 kb on + strand at 1039.597 kb on + strand at 1039.914 kb on - strand, within SMa1833 at 1039.914 kb on - strand, within SMa1833 at 1040.116 kb on + strand, within SMa1833 at 1040.117 kb on - strand, within SMa1833 at 1040.117 kb on - strand, within SMa1833 at 1040.117 kb on - strand, within SMa1833 at 1040.117 kb on - strand, within SMa1833 at 1040.134 kb on + strand, within SMa1833 at 1040.135 kb on - strand, within SMa1833 at 1040.228 kb on - strand, within SMa1833 at 1040.254 kb on - strand, within SMa1833 at 1040.331 kb on + strand, within SMa1833 at 1040.332 kb on - strand, within SMa1833 at 1040.332 kb on - strand, within SMa1833 at 1040.444 kb on + strand, within SMa1833
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.6030326667 mM remove 1,038,105 - +1.0 1,038,105 - -0.7 1,038,127 + +0.1 1,038,142 + -0.7 1,038,375 + -0.1 1,038,485 - SMa1831 0.23 -0.3 1,038,554 + SMa1831 0.34 -0.7 1,038,885 - SMa1831 0.89 -0.1 1,038,885 - SMa1831 0.89 -1.1 1,038,885 - SMa1831 0.89 -0.5 1,038,948 - +0.1 1,038,961 + -0.0 1,039,007 + -0.1 1,039,008 - +0.7 1,039,009 + -0.1 1,039,009 + +0.2 1,039,010 - -0.1 1,039,119 + SMa1832 0.23 +0.4 1,039,148 + SMa1832 0.30 +0.1 1,039,266 - SMa1832 0.56 +0.1 1,039,314 + SMa1832 0.66 +0.7 1,039,314 + SMa1832 0.66 +0.6 1,039,315 - SMa1832 0.67 +0.6 1,039,315 - SMa1832 0.67 +2.0 1,039,526 - +1.0 1,039,531 + +0.2 1,039,532 - +0.6 1,039,572 + +0.4 1,039,573 - -0.0 1,039,597 + -0.3 1,039,597 + +0.4 1,039,597 + +1.1 1,039,914 - SMa1833 0.29 -0.2 1,039,914 - SMa1833 0.29 +0.3 1,040,116 + SMa1833 0.44 +0.7 1,040,117 - SMa1833 0.44 -0.1 1,040,117 - SMa1833 0.44 -0.4 1,040,117 - SMa1833 0.44 -0.4 1,040,117 - SMa1833 0.44 +1.6 1,040,134 + SMa1833 0.45 +1.0 1,040,135 - SMa1833 0.45 -1.1 1,040,228 - SMa1833 0.52 +0.0 1,040,254 - SMa1833 0.54 -0.1 1,040,331 + SMa1833 0.59 -0.3 1,040,332 - SMa1833 0.59 -0.9 1,040,332 - SMa1833 0.59 -1.1 1,040,444 + SMa1833 0.68 +0.3
Or see this region's nucleotide sequence