Experiment: 1-octen-3-ol 0.6030326667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1493 and SMa1494 are separated by 86 nucleotides SMa1494 and SMa1495 are separated by 428 nucleotides
SMa1493: SMa1493 - LysR family transcriptional regulator, at 822,713 to 823,636
SMa1493
SMa1494: SMa1494 - hypothetical protein, at 823,723 to 824,163
SMa1494
SMa1495: SMa1495 - aminotransferase, at 824,592 to 825,704
SMa1495
Position (kb) 823
824
825 Strain fitness (log2 ratio) -2
-1
0
1
2 at 822.802 kb on - strand at 822.945 kb on + strand, within SMa1493 at 822.946 kb on - strand, within SMa1493 at 822.946 kb on - strand, within SMa1493 at 822.967 kb on + strand, within SMa1493 at 823.071 kb on - strand, within SMa1493 at 823.233 kb on - strand, within SMa1493 at 823.322 kb on + strand, within SMa1493 at 823.322 kb on + strand, within SMa1493 at 823.323 kb on - strand, within SMa1493 at 823.323 kb on - strand, within SMa1493 at 823.326 kb on + strand, within SMa1493 at 823.326 kb on + strand, within SMa1493 at 823.326 kb on + strand, within SMa1493 at 823.326 kb on + strand, within SMa1493 at 823.327 kb on - strand, within SMa1493 at 823.327 kb on - strand, within SMa1493 at 823.327 kb on - strand, within SMa1493 at 823.327 kb on - strand, within SMa1493 at 823.327 kb on - strand, within SMa1493 at 823.397 kb on + strand, within SMa1493 at 823.397 kb on + strand, within SMa1493 at 823.398 kb on - strand, within SMa1493 at 823.434 kb on + strand, within SMa1493 at 823.435 kb on - strand, within SMa1493 at 823.439 kb on + strand, within SMa1493 at 823.439 kb on + strand, within SMa1493 at 823.440 kb on - strand, within SMa1493 at 823.440 kb on - strand, within SMa1493 at 823.489 kb on - strand, within SMa1493 at 823.527 kb on - strand, within SMa1493 at 823.530 kb on - strand, within SMa1493 at 823.535 kb on + strand, within SMa1493 at 823.535 kb on + strand, within SMa1493 at 823.535 kb on + strand, within SMa1493 at 823.536 kb on - strand, within SMa1493 at 823.538 kb on + strand, within SMa1493 at 823.538 kb on + strand, within SMa1493 at 823.538 kb on + strand, within SMa1493 at 823.634 kb on + strand at 823.634 kb on + strand at 823.634 kb on + strand at 823.635 kb on - strand at 823.635 kb on - strand at 823.635 kb on - strand at 823.635 kb on - strand at 823.642 kb on - strand at 823.846 kb on + strand, within SMa1494 at 823.893 kb on - strand, within SMa1494 at 823.963 kb on - strand, within SMa1494 at 824.049 kb on + strand, within SMa1494 at 824.085 kb on + strand, within SMa1494 at 824.086 kb on - strand, within SMa1494 at 824.107 kb on + strand, within SMa1494 at 824.108 kb on - strand, within SMa1494 at 824.109 kb on + strand, within SMa1494 at 824.110 kb on - strand, within SMa1494 at 824.145 kb on + strand at 824.215 kb on + strand at 824.216 kb on - strand at 824.229 kb on + strand at 824.229 kb on + strand at 824.230 kb on - strand at 824.230 kb on - strand at 824.281 kb on + strand at 824.282 kb on - strand at 824.309 kb on - strand at 824.762 kb on + strand, within SMa1495 at 824.762 kb on + strand, within SMa1495 at 824.763 kb on - strand, within SMa1495 at 824.783 kb on - strand, within SMa1495 at 824.808 kb on + strand, within SMa1495 at 824.917 kb on + strand, within SMa1495
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.6030326667 mM remove 822,802 - +0.1 822,945 + SMa1493 0.25 -1.5 822,946 - SMa1493 0.25 -0.5 822,946 - SMa1493 0.25 +0.0 822,967 + SMa1493 0.27 +0.4 823,071 - SMa1493 0.39 -0.0 823,233 - SMa1493 0.56 -0.7 823,322 + SMa1493 0.66 +0.1 823,322 + SMa1493 0.66 +1.5 823,323 - SMa1493 0.66 -0.4 823,323 - SMa1493 0.66 +0.3 823,326 + SMa1493 0.66 +1.6 823,326 + SMa1493 0.66 -1.9 823,326 + SMa1493 0.66 -0.2 823,326 + SMa1493 0.66 -0.4 823,327 - SMa1493 0.66 +0.4 823,327 - SMa1493 0.66 -0.2 823,327 - SMa1493 0.66 -0.8 823,327 - SMa1493 0.66 +0.4 823,327 - SMa1493 0.66 -0.6 823,397 + SMa1493 0.74 -0.5 823,397 + SMa1493 0.74 +0.4 823,398 - SMa1493 0.74 -0.5 823,434 + SMa1493 0.78 +0.4 823,435 - SMa1493 0.78 -0.3 823,439 + SMa1493 0.79 -0.3 823,439 + SMa1493 0.79 -0.2 823,440 - SMa1493 0.79 +0.2 823,440 - SMa1493 0.79 -1.3 823,489 - SMa1493 0.84 +0.4 823,527 - SMa1493 0.88 -1.2 823,530 - SMa1493 0.88 +2.0 823,535 + SMa1493 0.89 +0.6 823,535 + SMa1493 0.89 +1.3 823,535 + SMa1493 0.89 +0.1 823,536 - SMa1493 0.89 +2.0 823,538 + SMa1493 0.89 +0.5 823,538 + SMa1493 0.89 +0.4 823,538 + SMa1493 0.89 -0.0 823,634 + -0.3 823,634 + +0.5 823,634 + -0.4 823,635 - -0.3 823,635 - +2.2 823,635 - +0.6 823,635 - +1.6 823,642 - +1.4 823,846 + SMa1494 0.28 -0.5 823,893 - SMa1494 0.39 +0.4 823,963 - SMa1494 0.54 +0.6 824,049 + SMa1494 0.74 -0.5 824,085 + SMa1494 0.82 +0.0 824,086 - SMa1494 0.82 -0.7 824,107 + SMa1494 0.87 -1.7 824,108 - SMa1494 0.87 -0.6 824,109 + SMa1494 0.88 +0.2 824,110 - SMa1494 0.88 -1.2 824,145 + +0.5 824,215 + +0.8 824,216 - +0.6 824,229 + -0.1 824,229 + +0.8 824,230 - -0.0 824,230 - -0.8 824,281 + -0.8 824,282 - -0.1 824,309 - +0.1 824,762 + SMa1495 0.15 -1.6 824,762 + SMa1495 0.15 +0.1 824,763 - SMa1495 0.15 +0.1 824,783 - SMa1495 0.17 -1.2 824,808 + SMa1495 0.19 +0.7 824,917 + SMa1495 0.29 -0.0
Or see this region's nucleotide sequence