Experiment: 1-octen-3-ol 0.6030326667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21021 and SM_b21022 are separated by 4 nucleotides SM_b21022 and SM_b21023 are separated by 3 nucleotides SM_b21023 and SM_b21024 are separated by 168 nucleotides SM_b21024 and SM_b21025 are separated by 11 nucleotides
SM_b21021: SM_b21021 - transcriptional regulator, at 644,175 to 645,122
_b21021
SM_b21022: SM_b21022 - autoinducer-2 (AI-2) kinase, at 645,127 to 646,725
_b21022
SM_b21023: SM_b21023 - hypothetical protein, at 646,729 to 647,043
_b21023
SM_b21024: SM_b21024 - hypothetical protein, at 647,212 to 647,379
_b21024
SM_b21025: SM_b21025 - hypothetical protein, at 647,391 to 647,810
_b21025
Position (kb) 645
646
647 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 644.244 kb on + strand at 644.245 kb on - strand at 644.245 kb on - strand at 644.247 kb on + strand at 644.247 kb on + strand at 644.248 kb on - strand at 644.248 kb on - strand at 644.248 kb on - strand at 644.250 kb on + strand at 644.250 kb on + strand at 644.348 kb on + strand, within SM_b21021 at 644.360 kb on + strand, within SM_b21021 at 644.360 kb on + strand at 644.373 kb on + strand, within SM_b21021 at 644.374 kb on - strand, within SM_b21021 at 644.416 kb on - strand, within SM_b21021 at 644.433 kb on + strand, within SM_b21021 at 644.433 kb on + strand, within SM_b21021 at 644.601 kb on - strand, within SM_b21021 at 644.601 kb on - strand, within SM_b21021 at 644.609 kb on - strand, within SM_b21021 at 644.637 kb on + strand, within SM_b21021 at 644.637 kb on + strand, within SM_b21021 at 644.638 kb on - strand, within SM_b21021 at 644.638 kb on - strand, within SM_b21021 at 644.638 kb on - strand, within SM_b21021 at 644.638 kb on - strand, within SM_b21021 at 644.784 kb on + strand, within SM_b21021 at 644.785 kb on - strand, within SM_b21021 at 644.842 kb on - strand, within SM_b21021 at 645.023 kb on + strand, within SM_b21021 at 645.024 kb on - strand, within SM_b21021 at 645.028 kb on + strand at 645.028 kb on + strand at 645.028 kb on + strand at 645.028 kb on + strand at 645.029 kb on - strand at 645.029 kb on - strand at 645.029 kb on - strand at 645.029 kb on - strand at 645.140 kb on - strand at 645.140 kb on - strand at 645.140 kb on - strand at 645.140 kb on - strand at 645.140 kb on - strand at 645.140 kb on - strand at 645.140 kb on - strand at 645.140 kb on - strand at 645.140 kb on - strand at 645.141 kb on + strand at 645.142 kb on - strand at 645.398 kb on - strand, within SM_b21022 at 645.505 kb on + strand, within SM_b21022 at 645.506 kb on - strand, within SM_b21022 at 645.508 kb on - strand, within SM_b21022 at 645.584 kb on - strand, within SM_b21022 at 645.584 kb on - strand, within SM_b21022 at 645.584 kb on - strand, within SM_b21022 at 645.663 kb on + strand, within SM_b21022 at 645.663 kb on + strand, within SM_b21022 at 645.663 kb on + strand, within SM_b21022 at 645.748 kb on - strand, within SM_b21022 at 645.972 kb on + strand, within SM_b21022 at 645.972 kb on + strand, within SM_b21022 at 646.049 kb on + strand, within SM_b21022 at 646.049 kb on + strand, within SM_b21022 at 646.050 kb on - strand, within SM_b21022 at 646.050 kb on - strand, within SM_b21022 at 646.050 kb on - strand, within SM_b21022 at 646.050 kb on - strand, within SM_b21022 at 646.118 kb on - strand, within SM_b21022 at 646.118 kb on - strand, within SM_b21022 at 646.163 kb on - strand, within SM_b21022 at 646.211 kb on - strand, within SM_b21022 at 646.341 kb on - strand, within SM_b21022 at 646.341 kb on - strand, within SM_b21022 at 646.359 kb on + strand, within SM_b21022 at 646.359 kb on + strand, within SM_b21022 at 646.587 kb on + strand at 646.587 kb on + strand at 646.587 kb on + strand at 646.588 kb on - strand at 646.620 kb on + strand at 646.621 kb on - strand at 646.693 kb on + strand at 646.696 kb on - strand at 646.713 kb on + strand at 646.714 kb on - strand at 646.714 kb on - strand at 646.723 kb on + strand at 646.723 kb on + strand at 646.724 kb on - strand at 646.746 kb on + strand at 646.746 kb on + strand at 646.747 kb on - strand at 646.747 kb on - strand at 646.804 kb on + strand, within SM_b21023 at 646.805 kb on - strand, within SM_b21023 at 646.805 kb on - strand, within SM_b21023 at 646.805 kb on - strand, within SM_b21023 at 646.885 kb on + strand, within SM_b21023 at 646.886 kb on - strand, within SM_b21023 at 646.886 kb on - strand, within SM_b21023 at 646.998 kb on - strand, within SM_b21023 at 646.999 kb on + strand, within SM_b21023 at 646.999 kb on + strand, within SM_b21023 at 646.999 kb on + strand, within SM_b21023 at 647.000 kb on - strand, within SM_b21023 at 647.000 kb on - strand, within SM_b21023 at 647.001 kb on + strand, within SM_b21023 at 647.002 kb on - strand, within SM_b21023 at 647.042 kb on - strand at 647.055 kb on + strand at 647.194 kb on - strand at 647.194 kb on - strand at 647.288 kb on + strand, within SM_b21024 at 647.289 kb on - strand, within SM_b21024 at 647.289 kb on - strand, within SM_b21024 at 647.443 kb on - strand, within SM_b21025 at 647.578 kb on + strand, within SM_b21025 at 647.579 kb on - strand, within SM_b21025 at 647.580 kb on + strand, within SM_b21025 at 647.580 kb on + strand, within SM_b21025 at 647.580 kb on + strand, within SM_b21025 at 647.580 kb on + strand, within SM_b21025 at 647.581 kb on - strand, within SM_b21025 at 647.581 kb on - strand, within SM_b21025 at 647.581 kb on - strand, within SM_b21025 at 647.706 kb on - strand, within SM_b21025
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.6030326667 mM remove 644,244 + +0.4 644,245 - +0.7 644,245 - +1.4 644,247 + +1.2 644,247 + +0.5 644,248 - -0.5 644,248 - +0.1 644,248 - -1.9 644,250 + +0.6 644,250 + -0.1 644,348 + SM_b21021 0.18 +0.4 644,360 + SM_b21021 0.20 +0.1 644,360 + +0.4 644,373 + SM_b21021 0.21 -0.5 644,374 - SM_b21021 0.21 -0.4 644,416 - SM_b21021 0.25 +2.2 644,433 + SM_b21021 0.27 -0.9 644,433 + SM_b21021 0.27 +0.9 644,601 - SM_b21021 0.45 +1.9 644,601 - SM_b21021 0.45 +0.4 644,609 - SM_b21021 0.46 +1.9 644,637 + SM_b21021 0.49 +0.4 644,637 + SM_b21021 0.49 -0.2 644,638 - SM_b21021 0.49 -1.4 644,638 - SM_b21021 0.49 -2.5 644,638 - SM_b21021 0.49 -0.1 644,638 - SM_b21021 0.49 +0.6 644,784 + SM_b21021 0.64 +0.5 644,785 - SM_b21021 0.64 +0.9 644,842 - SM_b21021 0.70 -2.3 645,023 + SM_b21021 0.89 +1.2 645,024 - SM_b21021 0.90 +0.4 645,028 + -0.1 645,028 + +0.3 645,028 + -0.5 645,028 + +0.1 645,029 - -0.4 645,029 - +0.9 645,029 - +2.9 645,029 - +0.9 645,140 - -1.1 645,140 - -0.6 645,140 - +0.3 645,140 - +1.1 645,140 - -0.2 645,140 - -0.2 645,140 - -0.1 645,140 - +0.3 645,140 - -1.2 645,141 + +0.2 645,142 - +1.9 645,398 - SM_b21022 0.17 +0.9 645,505 + SM_b21022 0.24 +0.1 645,506 - SM_b21022 0.24 +0.9 645,508 - SM_b21022 0.24 +0.7 645,584 - SM_b21022 0.29 -0.2 645,584 - SM_b21022 0.29 -0.1 645,584 - SM_b21022 0.29 -0.1 645,663 + SM_b21022 0.34 -0.1 645,663 + SM_b21022 0.34 -0.6 645,663 + SM_b21022 0.34 +0.7 645,748 - SM_b21022 0.39 +0.4 645,972 + SM_b21022 0.53 +0.1 645,972 + SM_b21022 0.53 +0.5 646,049 + SM_b21022 0.58 +1.5 646,049 + SM_b21022 0.58 +0.9 646,050 - SM_b21022 0.58 -0.1 646,050 - SM_b21022 0.58 +0.6 646,050 - SM_b21022 0.58 +0.2 646,050 - SM_b21022 0.58 +0.0 646,118 - SM_b21022 0.62 -0.6 646,118 - SM_b21022 0.62 +0.5 646,163 - SM_b21022 0.65 +0.5 646,211 - SM_b21022 0.68 +0.0 646,341 - SM_b21022 0.76 +0.6 646,341 - SM_b21022 0.76 +0.2 646,359 + SM_b21022 0.77 -0.1 646,359 + SM_b21022 0.77 +0.2 646,587 + +0.3 646,587 + -1.8 646,587 + +0.6 646,588 - +0.9 646,620 + -0.1 646,621 - +1.4 646,693 + +1.9 646,696 - -0.5 646,713 + -0.4 646,714 - -0.4 646,714 - -0.8 646,723 + +1.5 646,723 + -1.1 646,724 - -0.8 646,746 + +0.9 646,746 + +1.4 646,747 - +0.2 646,747 - +0.4 646,804 + SM_b21023 0.24 -0.1 646,805 - SM_b21023 0.24 +0.7 646,805 - SM_b21023 0.24 -0.2 646,805 - SM_b21023 0.24 -0.6 646,885 + SM_b21023 0.50 -0.1 646,886 - SM_b21023 0.50 +0.6 646,886 - SM_b21023 0.50 +0.7 646,998 - SM_b21023 0.85 -0.5 646,999 + SM_b21023 0.86 +0.2 646,999 + SM_b21023 0.86 -0.5 646,999 + SM_b21023 0.86 +0.1 647,000 - SM_b21023 0.86 -0.8 647,000 - SM_b21023 0.86 -0.5 647,001 + SM_b21023 0.86 -1.2 647,002 - SM_b21023 0.87 -0.3 647,042 - -0.3 647,055 + -0.2 647,194 - +0.2 647,194 - +0.4 647,288 + SM_b21024 0.45 +0.7 647,289 - SM_b21024 0.46 +0.4 647,289 - SM_b21024 0.46 -0.3 647,443 - SM_b21025 0.12 -0.4 647,578 + SM_b21025 0.45 +1.9 647,579 - SM_b21025 0.45 +0.1 647,580 + SM_b21025 0.45 +0.9 647,580 + SM_b21025 0.45 +0.5 647,580 + SM_b21025 0.45 +0.5 647,580 + SM_b21025 0.45 +0.5 647,581 - SM_b21025 0.45 +0.5 647,581 - SM_b21025 0.45 +0.0 647,581 - SM_b21025 0.45 -0.9 647,706 - SM_b21025 0.75 +0.2
Or see this region's nucleotide sequence