Experiment: 1-octen-3-ol 0.6030326667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc04016 and SMc04017 are separated by 310 nucleotides SMc04017 and SMc04018 are separated by 305 nucleotides SMc04018 and SMc04019 are separated by 119 nucleotides
SMc04016: SMc04016 - homospermidine synthase, at 3,012,431 to 3,013,882
SMc04016
SMc04017: SMc04017 - outer membrane lipoprotein, at 3,014,193 to 3,014,561
SMc04017
SMc04018: SMc04018 - 5'-nucleotidase, at 3,014,867 to 3,016,753
SMc04018
SMc04019: SMc04019 - ferrochelatase, at 3,016,873 to 3,017,901
SMc04019
Position (kb)
3014
3015
3016
3017 Strain fitness (log2 ratio)
-1
0
1 at 3014.646 kb on - strand at 3014.737 kb on + strand at 3014.738 kb on - strand at 3014.743 kb on + strand at 3014.744 kb on - strand at 3014.813 kb on + strand at 3014.830 kb on + strand at 3015.078 kb on + strand, within SMc04018 at 3015.079 kb on - strand, within SMc04018 at 3015.079 kb on - strand at 3015.167 kb on + strand, within SMc04018 at 3015.167 kb on + strand, within SMc04018 at 3015.167 kb on + strand, within SMc04018 at 3015.168 kb on - strand, within SMc04018 at 3015.168 kb on - strand, within SMc04018 at 3015.168 kb on - strand, within SMc04018 at 3015.648 kb on - strand, within SMc04018 at 3015.693 kb on + strand, within SMc04018 at 3015.693 kb on + strand, within SMc04018 at 3015.693 kb on + strand, within SMc04018 at 3015.707 kb on + strand, within SMc04018 at 3015.708 kb on - strand, within SMc04018 at 3015.716 kb on + strand, within SMc04018 at 3015.717 kb on - strand, within SMc04018 at 3016.199 kb on + strand, within SMc04018 at 3016.200 kb on - strand, within SMc04018 at 3016.295 kb on + strand, within SMc04018 at 3016.373 kb on + strand, within SMc04018 at 3016.373 kb on + strand, within SMc04018 at 3016.380 kb on - strand, within SMc04018 at 3016.413 kb on - strand, within SMc04018 at 3016.413 kb on - strand, within SMc04018 at 3016.442 kb on + strand, within SMc04018 at 3016.652 kb on + strand at 3016.652 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.6030326667 mM remove 3,014,646 - -0.5 3,014,737 + +0.7 3,014,738 - -0.3 3,014,743 + -0.5 3,014,744 - +0.2 3,014,813 + +0.4 3,014,830 + -0.4 3,015,078 + SMc04018 0.11 -0.1 3,015,079 - SMc04018 0.11 -0.3 3,015,079 - +0.1 3,015,167 + SMc04018 0.16 -0.3 3,015,167 + SMc04018 0.16 -0.4 3,015,167 + SMc04018 0.16 -0.9 3,015,168 - SMc04018 0.16 +0.8 3,015,168 - SMc04018 0.16 +0.2 3,015,168 - SMc04018 0.16 +1.1 3,015,648 - SMc04018 0.41 +0.7 3,015,693 + SMc04018 0.44 +0.3 3,015,693 + SMc04018 0.44 -0.9 3,015,693 + SMc04018 0.44 +0.4 3,015,707 + SMc04018 0.45 -0.1 3,015,708 - SMc04018 0.45 +0.9 3,015,716 + SMc04018 0.45 -0.2 3,015,717 - SMc04018 0.45 -0.9 3,016,199 + SMc04018 0.71 +0.3 3,016,200 - SMc04018 0.71 -1.1 3,016,295 + SMc04018 0.76 -0.1 3,016,373 + SMc04018 0.80 +0.4 3,016,373 + SMc04018 0.80 -0.0 3,016,380 - SMc04018 0.80 +0.1 3,016,413 - SMc04018 0.82 +0.2 3,016,413 - SMc04018 0.82 -0.1 3,016,442 + SMc04018 0.83 -0.6 3,016,652 + -0.1 3,016,652 + +0.2
Or see this region's nucleotide sequence