Experiment: 1-octen-3-ol 0.6030326667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21165 and SM_b21166 overlap by 4 nucleotides SM_b21166 and SM_b21167 are separated by 34 nucleotides
SM_b21165: SM_b21165 - Histidine ammonia-lyase (EC 4.3.1.3) (from data) , at 910,662 to 912,197
_b21165
SM_b21166: SM_b21166 - Imidazolonepropionase (EC 3.5.2.7) (from data) , at 912,194 to 913,609
_b21166
SM_b21167: SM_b21167 - reverse transcriptasematurase, at 913,644 to 915,005
_b21167
Position (kb)
912
913
914 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 911.359 kb on + strand, within SM_b21165 at 911.359 kb on + strand, within SM_b21165 at 911.359 kb on + strand, within SM_b21165 at 911.360 kb on - strand, within SM_b21165 at 911.360 kb on - strand, within SM_b21165 at 911.459 kb on + strand, within SM_b21165 at 911.744 kb on + strand, within SM_b21165 at 911.745 kb on - strand, within SM_b21165 at 911.745 kb on - strand, within SM_b21165 at 911.938 kb on - strand, within SM_b21165 at 912.040 kb on + strand, within SM_b21165 at 912.142 kb on + strand at 912.142 kb on + strand at 912.143 kb on - strand at 912.255 kb on + strand at 912.543 kb on + strand, within SM_b21166 at 912.616 kb on - strand, within SM_b21166 at 912.645 kb on + strand, within SM_b21166 at 912.850 kb on - strand, within SM_b21166 at 912.900 kb on + strand, within SM_b21166 at 912.900 kb on + strand, within SM_b21166 at 912.998 kb on - strand, within SM_b21166 at 913.137 kb on + strand, within SM_b21166 at 913.138 kb on - strand, within SM_b21166 at 913.195 kb on + strand, within SM_b21166 at 913.195 kb on + strand, within SM_b21166 at 913.441 kb on + strand, within SM_b21166 at 913.442 kb on - strand, within SM_b21166 at 913.478 kb on - strand at 913.478 kb on - strand at 913.517 kb on + strand at 914.503 kb on + strand, within SM_b21167 at 914.503 kb on + strand, within SM_b21167 at 914.503 kb on + strand, within SM_b21167 at 914.504 kb on + strand, within SM_b21167 at 914.504 kb on - strand, within SM_b21167 at 914.504 kb on - strand, within SM_b21167
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.6030326667 mM remove 911,359 + SM_b21165 0.45 +0.0 911,359 + SM_b21165 0.45 -0.8 911,359 + SM_b21165 0.45 +0.2 911,360 - SM_b21165 0.45 +0.1 911,360 - SM_b21165 0.45 -0.6 911,459 + SM_b21165 0.52 +1.1 911,744 + SM_b21165 0.70 +4.0 911,745 - SM_b21165 0.71 +0.2 911,745 - SM_b21165 0.71 -0.1 911,938 - SM_b21165 0.83 -0.1 912,040 + SM_b21165 0.90 +0.0 912,142 + -0.2 912,142 + -0.7 912,143 - -0.4 912,255 + -0.1 912,543 + SM_b21166 0.25 +0.0 912,616 - SM_b21166 0.30 +0.3 912,645 + SM_b21166 0.32 +0.5 912,850 - SM_b21166 0.46 -1.1 912,900 + SM_b21166 0.50 -0.1 912,900 + SM_b21166 0.50 -0.5 912,998 - SM_b21166 0.57 -0.0 913,137 + SM_b21166 0.67 -1.1 913,138 - SM_b21166 0.67 +1.1 913,195 + SM_b21166 0.71 +2.4 913,195 + SM_b21166 0.71 -0.2 913,441 + SM_b21166 0.88 -0.6 913,442 - SM_b21166 0.88 -0.0 913,478 - +0.8 913,478 - +0.8 913,517 + -1.2 914,503 + SM_b21167 0.63 +0.8 914,503 + SM_b21167 0.63 +1.3 914,503 + SM_b21167 0.63 -1.0 914,504 + SM_b21167 0.63 -0.0 914,504 - SM_b21167 0.63 +1.6 914,504 - SM_b21167 0.63 -0.7
Or see this region's nucleotide sequence