Experiment: 1-octen-3-ol 0.6030326667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02323 and SMc02324 are separated by 113 nucleotides SMc02324 and SMc02325 are separated by 189 nucleotides
SMc02323: SMc02323 - transcriptional regulator, at 694,158 to 694,970
SMc02323
SMc02324: SMc02324 - periplasmic binding ABC transporter protein, at 695,084 to 696,073
SMc02324
SMc02325: SMc02325 - ABC transporter ATP-binding protein, at 696,263 to 697,774
SMc02325
Position (kb) 695
696
697 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 694.602 kb on + strand, within SMc02323 at 694.621 kb on + strand, within SMc02323 at 694.621 kb on + strand, within SMc02323 at 694.622 kb on - strand, within SMc02323 at 694.622 kb on - strand, within SMc02323 at 694.622 kb on - strand, within SMc02323 at 694.659 kb on + strand, within SMc02323 at 694.660 kb on - strand, within SMc02323 at 695.141 kb on - strand at 695.267 kb on + strand, within SMc02324 at 695.267 kb on + strand, within SMc02324 at 695.268 kb on - strand, within SMc02324 at 695.268 kb on - strand, within SMc02324 at 695.604 kb on - strand, within SMc02324 at 695.621 kb on + strand, within SMc02324 at 695.622 kb on - strand, within SMc02324 at 695.622 kb on - strand, within SMc02324 at 695.898 kb on - strand, within SMc02324 at 695.918 kb on + strand, within SMc02324 at 695.918 kb on + strand, within SMc02324 at 695.918 kb on + strand, within SMc02324 at 696.033 kb on - strand at 696.033 kb on - strand at 696.033 kb on - strand at 696.141 kb on + strand at 696.142 kb on - strand at 696.142 kb on - strand at 696.291 kb on + strand at 696.292 kb on - strand at 696.345 kb on - strand at 696.408 kb on + strand at 696.409 kb on - strand at 696.409 kb on - strand at 696.422 kb on + strand, within SMc02325 at 696.422 kb on + strand, within SMc02325 at 696.423 kb on - strand, within SMc02325 at 696.804 kb on - strand, within SMc02325 at 696.804 kb on - strand, within SMc02325 at 696.894 kb on - strand, within SMc02325 at 696.896 kb on - strand, within SMc02325
Per-strain Table
Position Strand Gene LocusTag Fraction 1-octen-3-ol 0.6030326667 mM remove 694,602 + SMc02323 0.55 +1.4 694,621 + SMc02323 0.57 -0.0 694,621 + SMc02323 0.57 +0.3 694,622 - SMc02323 0.57 +1.8 694,622 - SMc02323 0.57 +0.2 694,622 - SMc02323 0.57 +2.8 694,659 + SMc02323 0.62 -0.1 694,660 - SMc02323 0.62 -0.8 695,141 - -1.8 695,267 + SMc02324 0.18 -0.4 695,267 + SMc02324 0.18 +0.2 695,268 - SMc02324 0.19 -0.4 695,268 - SMc02324 0.19 -0.6 695,604 - SMc02324 0.53 -1.1 695,621 + SMc02324 0.54 -0.1 695,622 - SMc02324 0.54 -0.8 695,622 - SMc02324 0.54 -0.9 695,898 - SMc02324 0.82 +0.1 695,918 + SMc02324 0.84 -0.6 695,918 + SMc02324 0.84 -0.1 695,918 + SMc02324 0.84 +0.1 696,033 - +0.3 696,033 - +0.3 696,033 - -0.1 696,141 + +1.1 696,142 - +0.8 696,142 - -0.7 696,291 + -0.5 696,292 - +0.1 696,345 - -0.2 696,408 + -0.3 696,409 - -0.5 696,409 - -0.5 696,422 + SMc02325 0.11 -1.3 696,422 + SMc02325 0.11 -0.0 696,423 - SMc02325 0.11 -0.4 696,804 - SMc02325 0.36 -0.2 696,804 - SMc02325 0.36 -0.1 696,894 - SMc02325 0.42 +0.0 696,896 - SMc02325 0.42 +0.7
Or see this region's nucleotide sequence