Experiment: 6-Pentyl-2H-pyran-2-one 0.385649 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1905 and SMa1907 are separated by 658 nucleotides
SMa1905: SMa1905 - MrcB penicillin binding protein B, at 1,082,806 to 1,085,151
SMa1905
SMa1907: SMa1907 - hypothetical protein, at 1,085,810 to 1,086,190
SMa1907
Position (kb)
1085
1086
1087 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1084.954 kb on - strand at 1085.062 kb on - strand at 1085.062 kb on - strand at 1085.080 kb on + strand at 1085.080 kb on + strand at 1085.080 kb on + strand at 1085.081 kb on - strand at 1085.110 kb on + strand at 1085.111 kb on - strand at 1085.149 kb on + strand at 1085.247 kb on - strand at 1085.377 kb on - strand at 1085.377 kb on - strand at 1085.378 kb on + strand at 1085.379 kb on - strand at 1085.431 kb on - strand at 1085.431 kb on - strand at 1085.431 kb on - strand at 1085.503 kb on + strand at 1085.503 kb on + strand at 1085.812 kb on - strand at 1085.994 kb on + strand, within SMa1907 at 1085.995 kb on - strand, within SMa1907 at 1086.046 kb on + strand, within SMa1907 at 1086.126 kb on + strand, within SMa1907 at 1086.134 kb on - strand, within SMa1907 at 1086.171 kb on - strand at 1086.171 kb on - strand at 1086.171 kb on - strand at 1086.195 kb on - strand at 1086.678 kb on + strand at 1086.685 kb on + strand at 1086.685 kb on + strand at 1086.685 kb on + strand at 1086.686 kb on - strand at 1086.687 kb on + strand at 1086.688 kb on - strand at 1086.688 kb on - strand at 1086.688 kb on - strand at 1086.688 kb on - strand at 1086.989 kb on + strand at 1087.009 kb on + strand at 1087.009 kb on + strand at 1087.009 kb on + strand at 1087.009 kb on + strand at 1087.009 kb on + strand at 1087.009 kb on + strand at 1087.009 kb on + strand at 1087.010 kb on - strand at 1087.010 kb on - strand at 1087.010 kb on - strand at 1087.010 kb on - strand at 1087.011 kb on + strand at 1087.011 kb on + strand at 1087.012 kb on - strand at 1087.012 kb on - strand at 1087.013 kb on + strand at 1087.013 kb on + strand at 1087.014 kb on - strand at 1087.014 kb on - strand at 1087.014 kb on - strand at 1087.014 kb on - strand at 1087.064 kb on + strand at 1087.065 kb on - strand at 1087.065 kb on - strand at 1087.078 kb on - strand at 1087.136 kb on - strand at 1087.136 kb on - strand at 1087.139 kb on + strand at 1087.175 kb on - strand at 1087.185 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.385649 mM remove 1,084,954 - +2.2 1,085,062 - -0.2 1,085,062 - -0.1 1,085,080 + +0.1 1,085,080 + -0.6 1,085,080 + +0.6 1,085,081 - +0.4 1,085,110 + +0.3 1,085,111 - -1.1 1,085,149 + +0.3 1,085,247 - +0.4 1,085,377 - -0.1 1,085,377 - -0.9 1,085,378 + -0.2 1,085,379 - -0.9 1,085,431 - +0.1 1,085,431 - -1.8 1,085,431 - +0.6 1,085,503 + -0.4 1,085,503 + +0.2 1,085,812 - -0.0 1,085,994 + SMa1907 0.48 -0.2 1,085,995 - SMa1907 0.49 -0.5 1,086,046 + SMa1907 0.62 -1.0 1,086,126 + SMa1907 0.83 -0.2 1,086,134 - SMa1907 0.85 +0.2 1,086,171 - -0.9 1,086,171 - +1.9 1,086,171 - -0.1 1,086,195 - +0.1 1,086,678 + +0.4 1,086,685 + +0.1 1,086,685 + -1.8 1,086,685 + +1.6 1,086,686 - +0.7 1,086,687 + -0.8 1,086,688 - -0.4 1,086,688 - -0.8 1,086,688 - -1.1 1,086,688 - +0.3 1,086,989 + -0.9 1,087,009 + +0.5 1,087,009 + -1.5 1,087,009 + +0.2 1,087,009 + +0.2 1,087,009 + +0.2 1,087,009 + -0.4 1,087,009 + -0.4 1,087,010 - +0.1 1,087,010 - -0.0 1,087,010 - -0.2 1,087,010 - -0.1 1,087,011 + -0.0 1,087,011 + +0.1 1,087,012 - -0.1 1,087,012 - -1.1 1,087,013 + -0.1 1,087,013 + -0.3 1,087,014 - -0.9 1,087,014 - +0.4 1,087,014 - +0.8 1,087,014 - +0.1 1,087,064 + -0.3 1,087,065 - +0.0 1,087,065 - -0.5 1,087,078 - -0.1 1,087,136 - -0.4 1,087,136 - -0.8 1,087,139 + +0.0 1,087,175 - -0.3 1,087,185 + +0.2
Or see this region's nucleotide sequence