Experiment: 6-Pentyl-2H-pyran-2-one 0.385649 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1126 and SMa1128 are separated by 53 nucleotides SMa1128 and SMa1131 are separated by 194 nucleotides
SMa1126: SMa1126 - Protease, at 613,774 to 614,892
SMa1126
SMa1128: SMa1128 - DegP4 protease like protein, at 614,946 to 616,274
SMa1128
SMa1131: SMa1131 - Metallo-beta-lactamase superfamily protein, at 616,469 to 618,064
SMa1131
Position (kb) 614
615
616
617 Strain fitness (log2 ratio) -1
0
1 at 614.146 kb on + strand, within SMa1126 at 614.255 kb on + strand, within SMa1126 at 614.290 kb on - strand, within SMa1126 at 614.290 kb on - strand, within SMa1126 at 614.291 kb on + strand, within SMa1126 at 614.291 kb on + strand, within SMa1126 at 614.292 kb on - strand, within SMa1126 at 614.292 kb on - strand, within SMa1126 at 614.292 kb on - strand, within SMa1126 at 614.292 kb on - strand, within SMa1126 at 614.429 kb on - strand, within SMa1126 at 614.704 kb on + strand, within SMa1126 at 614.759 kb on - strand, within SMa1126 at 614.759 kb on - strand, within SMa1126 at 614.842 kb on + strand at 614.843 kb on - strand at 614.843 kb on - strand at 614.906 kb on + strand at 614.906 kb on + strand at 615.076 kb on + strand at 615.077 kb on - strand at 615.434 kb on + strand, within SMa1128 at 615.435 kb on - strand, within SMa1128 at 615.435 kb on - strand, within SMa1128 at 615.514 kb on + strand, within SMa1128 at 615.588 kb on - strand, within SMa1128 at 615.701 kb on - strand, within SMa1128 at 615.709 kb on + strand, within SMa1128 at 615.723 kb on + strand, within SMa1128 at 615.853 kb on - strand, within SMa1128 at 615.907 kb on - strand, within SMa1128 at 615.994 kb on + strand, within SMa1128 at 615.995 kb on - strand, within SMa1128 at 615.995 kb on - strand, within SMa1128 at 615.995 kb on - strand, within SMa1128 at 616.059 kb on + strand, within SMa1128 at 616.059 kb on + strand, within SMa1128 at 616.059 kb on + strand, within SMa1128 at 616.060 kb on - strand, within SMa1128 at 616.245 kb on + strand at 616.245 kb on + strand at 616.245 kb on + strand at 616.246 kb on - strand at 616.246 kb on - strand at 616.264 kb on - strand at 616.851 kb on + strand, within SMa1131 at 616.852 kb on - strand, within SMa1131 at 616.852 kb on - strand, within SMa1131 at 616.852 kb on - strand, within SMa1131 at 616.904 kb on - strand, within SMa1131 at 616.904 kb on - strand, within SMa1131 at 616.960 kb on - strand, within SMa1131 at 617.059 kb on + strand, within SMa1131 at 617.060 kb on - strand, within SMa1131 at 617.224 kb on + strand, within SMa1131 at 617.258 kb on + strand, within SMa1131 at 617.258 kb on + strand, within SMa1131 at 617.259 kb on - strand, within SMa1131 at 617.259 kb on - strand, within SMa1131
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.385649 mM remove 614,146 + SMa1126 0.33 -1.2 614,255 + SMa1126 0.43 -0.2 614,290 - SMa1126 0.46 -0.1 614,290 - SMa1126 0.46 +0.6 614,291 + SMa1126 0.46 +0.3 614,291 + SMa1126 0.46 -1.0 614,292 - SMa1126 0.46 -1.1 614,292 - SMa1126 0.46 +0.5 614,292 - SMa1126 0.46 +0.7 614,292 - SMa1126 0.46 -1.0 614,429 - SMa1126 0.59 -0.6 614,704 + SMa1126 0.83 +0.6 614,759 - SMa1126 0.88 -0.3 614,759 - SMa1126 0.88 +0.0 614,842 + +0.4 614,843 - +1.2 614,843 - -1.4 614,906 + +1.2 614,906 + -0.9 615,076 + +0.2 615,077 - +0.3 615,434 + SMa1128 0.37 +0.0 615,435 - SMa1128 0.37 -0.3 615,435 - SMa1128 0.37 +0.3 615,514 + SMa1128 0.43 +0.2 615,588 - SMa1128 0.48 +0.4 615,701 - SMa1128 0.57 +0.2 615,709 + SMa1128 0.57 +1.2 615,723 + SMa1128 0.58 -0.1 615,853 - SMa1128 0.68 -0.6 615,907 - SMa1128 0.72 -0.5 615,994 + SMa1128 0.79 -1.3 615,995 - SMa1128 0.79 +1.0 615,995 - SMa1128 0.79 -0.8 615,995 - SMa1128 0.79 -0.6 616,059 + SMa1128 0.84 +0.6 616,059 + SMa1128 0.84 +0.3 616,059 + SMa1128 0.84 -0.6 616,060 - SMa1128 0.84 -0.4 616,245 + -0.6 616,245 + -0.5 616,245 + -1.1 616,246 - -0.6 616,246 - -0.3 616,264 - -1.4 616,851 + SMa1131 0.24 -0.2 616,852 - SMa1131 0.24 +0.2 616,852 - SMa1131 0.24 -1.4 616,852 - SMa1131 0.24 +0.8 616,904 - SMa1131 0.27 -0.9 616,904 - SMa1131 0.27 +0.5 616,960 - SMa1131 0.31 +0.7 617,059 + SMa1131 0.37 -1.5 617,060 - SMa1131 0.37 -1.3 617,224 + SMa1131 0.47 -0.6 617,258 + SMa1131 0.49 -0.3 617,258 + SMa1131 0.49 -0.8 617,259 - SMa1131 0.49 -0.1 617,259 - SMa1131 0.49 -0.9
Or see this region's nucleotide sequence