Experiment: 6-Pentyl-2H-pyran-2-one 0.385649 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20021 and SM_b20022 are separated by 647 nucleotides SM_b20022 and SM_b20023 are separated by 76 nucleotides
SM_b20021: SM_b20021 - transcriptional regulator, at 29,540 to 30,010
_b20021
SM_b20022: SM_b20022 - hypothetical protein, at 30,658 to 31,224
_b20022
SM_b20023: SM_b20023 - hypothetical protein, at 31,301 to 34,918
_b20023
Position (kb) 30
31
32 Strain fitness (log2 ratio) -1
0
1 at 29.843 kb on + strand, within SM_b20021 at 29.987 kb on + strand at 29.987 kb on + strand at 29.988 kb on - strand at 30.008 kb on + strand at 30.170 kb on - strand at 30.170 kb on - strand at 30.189 kb on + strand at 30.189 kb on + strand at 30.189 kb on + strand at 30.190 kb on - strand at 30.196 kb on + strand at 30.196 kb on + strand at 30.197 kb on - strand at 30.370 kb on + strand at 30.371 kb on - strand at 30.371 kb on - strand at 30.471 kb on + strand at 30.471 kb on + strand at 30.471 kb on + strand at 30.471 kb on + strand at 30.471 kb on + strand at 30.472 kb on - strand at 31.134 kb on + strand, within SM_b20022 at 31.135 kb on - strand, within SM_b20022 at 31.135 kb on - strand, within SM_b20022 at 31.138 kb on + strand, within SM_b20022 at 31.139 kb on - strand, within SM_b20022 at 31.139 kb on - strand, within SM_b20022 at 31.247 kb on + strand at 31.248 kb on - strand at 31.248 kb on - strand at 31.302 kb on + strand at 31.318 kb on - strand at 31.372 kb on + strand at 31.537 kb on + strand at 31.725 kb on + strand, within SM_b20023 at 31.725 kb on + strand, within SM_b20023 at 31.725 kb on + strand, within SM_b20023 at 31.726 kb on - strand, within SM_b20023 at 31.835 kb on + strand, within SM_b20023 at 31.835 kb on + strand, within SM_b20023 at 31.836 kb on - strand, within SM_b20023 at 31.836 kb on - strand, within SM_b20023 at 31.836 kb on - strand, within SM_b20023 at 31.836 kb on - strand, within SM_b20023 at 31.965 kb on + strand, within SM_b20023 at 31.965 kb on + strand, within SM_b20023 at 31.966 kb on - strand, within SM_b20023 at 31.966 kb on - strand, within SM_b20023 at 31.966 kb on - strand, within SM_b20023 at 31.966 kb on - strand, within SM_b20023 at 31.966 kb on - strand, within SM_b20023 at 31.966 kb on - strand, within SM_b20023 at 31.966 kb on - strand, within SM_b20023 at 32.188 kb on + strand, within SM_b20023 at 32.188 kb on + strand, within SM_b20023 at 32.190 kb on + strand, within SM_b20023 at 32.190 kb on + strand, within SM_b20023 at 32.190 kb on + strand, within SM_b20023 at 32.191 kb on - strand, within SM_b20023 at 32.191 kb on - strand, within SM_b20023 at 32.191 kb on - strand, within SM_b20023 at 32.191 kb on - strand, within SM_b20023
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.385649 mM remove 29,843 + SM_b20021 0.64 -1.3 29,987 + -0.6 29,987 + -0.8 29,988 - -0.9 30,008 + +0.5 30,170 - +1.1 30,170 - +0.7 30,189 + -1.2 30,189 + +0.0 30,189 + -0.2 30,190 - -1.0 30,196 + -0.2 30,196 + -0.4 30,197 - +0.6 30,370 + +0.6 30,371 - -0.8 30,371 - -0.6 30,471 + -0.2 30,471 + +0.8 30,471 + +0.2 30,471 + +0.3 30,471 + -0.0 30,472 - -0.8 31,134 + SM_b20022 0.84 -1.1 31,135 - SM_b20022 0.84 +0.4 31,135 - SM_b20022 0.84 +0.1 31,138 + SM_b20022 0.85 -0.7 31,139 - SM_b20022 0.85 -0.9 31,139 - SM_b20022 0.85 +0.5 31,247 + -0.0 31,248 - -0.4 31,248 - +0.4 31,302 + -0.7 31,318 - +0.4 31,372 + +0.1 31,537 + -0.3 31,725 + SM_b20023 0.12 -0.4 31,725 + SM_b20023 0.12 -1.4 31,725 + SM_b20023 0.12 -0.4 31,726 - SM_b20023 0.12 -0.1 31,835 + SM_b20023 0.15 +0.2 31,835 + SM_b20023 0.15 -0.6 31,836 - SM_b20023 0.15 +0.0 31,836 - SM_b20023 0.15 -0.2 31,836 - SM_b20023 0.15 -0.1 31,836 - SM_b20023 0.15 +0.6 31,965 + SM_b20023 0.18 +0.4 31,965 + SM_b20023 0.18 -0.4 31,966 - SM_b20023 0.18 -0.4 31,966 - SM_b20023 0.18 -0.9 31,966 - SM_b20023 0.18 +0.2 31,966 - SM_b20023 0.18 -0.5 31,966 - SM_b20023 0.18 +0.2 31,966 - SM_b20023 0.18 -0.0 31,966 - SM_b20023 0.18 +0.0 32,188 + SM_b20023 0.25 +1.4 32,188 + SM_b20023 0.25 -0.3 32,190 + SM_b20023 0.25 +0.1 32,190 + SM_b20023 0.25 -0.0 32,190 + SM_b20023 0.25 +1.5 32,191 - SM_b20023 0.25 +0.5 32,191 - SM_b20023 0.25 -0.8 32,191 - SM_b20023 0.25 -0.1 32,191 - SM_b20023 0.25 -0.3
Or see this region's nucleotide sequence