Strain Fitness in Sinorhizobium meliloti 1021 around SMc02758

Experiment: 6-Pentyl-2H-pyran-2-one 0.385649 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSMc02759 and SMc02758 are separated by 1 nucleotidesSMc02758 and SMc02757 are separated by 6 nucleotides SMc02759: SMc02759 - hypothetical protein, at 38,055 to 41,234 SMc02759 SMc02758: SMc02758 - nucleotidyl transferase, at 41,236 to 41,967 SMc02758 SMc02757: SMc02757 - hypothetical protein, at 41,974 to 43,488 SMc02757 Position (kb) 41 42Strain fitness (log2 ratio) -1 0 1 2at 41.282 kb on - strandat 41.367 kb on - strand, within SMc02758at 41.852 kb on + strand, within SMc02758at 41.853 kb on - strand, within SMc02758at 41.853 kb on - strand, within SMc02758at 41.876 kb on - strand, within SMc02758at 42.012 kb on + strandat 42.236 kb on + strand, within SMc02757at 42.237 kb on - strand, within SMc02757at 42.311 kb on + strand, within SMc02757at 42.312 kb on - strand, within SMc02757at 42.477 kb on - strand, within SMc02757at 42.527 kb on + strand, within SMc02757at 42.671 kb on + strand, within SMc02757at 42.860 kb on + strand, within SMc02757at 42.861 kb on - strand, within SMc02757at 42.861 kb on - strand, within SMc02757at 42.861 kb on - strand, within SMc02757at 42.879 kb on + strand, within SMc02757at 42.879 kb on + strand, within SMc02757at 42.880 kb on - strand, within SMc02757at 42.880 kb on - strand, within SMc02757at 42.880 kb on - strand, within SMc02757

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Per-strain Table

Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.385649 mM
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41,282 - -0.4
41,367 - SMc02758 0.18 +0.1
41,852 + SMc02758 0.84 -1.4
41,853 - SMc02758 0.84 -0.3
41,853 - SMc02758 0.84 -0.5
41,876 - SMc02758 0.87 +0.5
42,012 + -0.5
42,236 + SMc02757 0.17 -0.5
42,237 - SMc02757 0.17 +0.5
42,311 + SMc02757 0.22 -1.6
42,312 - SMc02757 0.22 -0.7
42,477 - SMc02757 0.33 +2.1
42,527 + SMc02757 0.37 -0.1
42,671 + SMc02757 0.46 -0.3
42,860 + SMc02757 0.58 -0.4
42,861 - SMc02757 0.59 -0.2
42,861 - SMc02757 0.59 +0.2
42,861 - SMc02757 0.59 -0.9
42,879 + SMc02757 0.60 -1.1
42,879 + SMc02757 0.60 -0.2
42,880 - SMc02757 0.60 -0.7
42,880 - SMc02757 0.60 +0.2
42,880 - SMc02757 0.60 -1.1

Or see this region's nucleotide sequence