Experiment: 6-Pentyl-2H-pyran-2-one 0.385649 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1951 and SMa1952 are separated by 124 nucleotides SMa1952 and SMa1953 are separated by 220 nucleotides
SMa1951: SMa1951 - hypothetical protein, at 1,107,299 to 1,107,562
SMa1951
SMa1952: SMa1952 - Beta lactamase, at 1,107,687 to 1,108,532
SMa1952
SMa1953: SMa1953 - beta-lactamase, at 1,108,753 to 1,109,757
SMa1953
Position (kb)
1107
1108
1109 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1106.775 kb on + strand at 1106.776 kb on - strand at 1106.776 kb on - strand at 1106.776 kb on - strand at 1106.776 kb on - strand at 1106.781 kb on + strand at 1106.781 kb on + strand at 1106.782 kb on - strand at 1106.837 kb on - strand at 1106.995 kb on + strand at 1106.995 kb on + strand at 1106.995 kb on + strand at 1107.087 kb on + strand at 1107.087 kb on + strand at 1107.210 kb on + strand at 1107.210 kb on + strand at 1107.210 kb on + strand at 1107.211 kb on - strand at 1107.211 kb on - strand at 1107.211 kb on - strand at 1107.230 kb on + strand at 1107.490 kb on + strand, within SMa1951 at 1107.490 kb on + strand, within SMa1951 at 1107.684 kb on - strand at 1107.770 kb on - strand at 1107.824 kb on + strand, within SMa1952 at 1107.887 kb on + strand, within SMa1952 at 1107.888 kb on - strand, within SMa1952 at 1108.087 kb on - strand, within SMa1952 at 1108.158 kb on + strand, within SMa1952 at 1108.158 kb on + strand, within SMa1952 at 1108.158 kb on + strand, within SMa1952 at 1108.159 kb on - strand, within SMa1952 at 1108.605 kb on - strand at 1108.645 kb on + strand at 1108.646 kb on - strand at 1108.646 kb on - strand at 1108.646 kb on - strand at 1108.653 kb on + strand at 1108.691 kb on + strand at 1108.691 kb on + strand at 1108.692 kb on - strand at 1108.693 kb on - strand at 1108.754 kb on + strand at 1108.755 kb on - strand at 1108.755 kb on - strand at 1108.755 kb on - strand at 1108.760 kb on + strand at 1108.761 kb on - strand at 1108.761 kb on - strand at 1109.001 kb on + strand, within SMa1953 at 1109.120 kb on + strand, within SMa1953 at 1109.386 kb on - strand, within SMa1953 at 1109.386 kb on - strand, within SMa1953 at 1109.418 kb on + strand, within SMa1953 at 1109.463 kb on + strand, within SMa1953 at 1109.465 kb on + strand, within SMa1953 at 1109.466 kb on + strand, within SMa1953 at 1109.467 kb on - strand, within SMa1953
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.385649 mM remove 1,106,775 + +0.3 1,106,776 - +0.0 1,106,776 - -0.3 1,106,776 - -0.1 1,106,776 - -0.5 1,106,781 + -0.6 1,106,781 + +0.5 1,106,782 - -0.4 1,106,837 - -0.0 1,106,995 + -1.9 1,106,995 + -0.1 1,106,995 + +0.1 1,107,087 + +1.2 1,107,087 + +0.3 1,107,210 + +1.1 1,107,210 + -0.0 1,107,210 + +2.1 1,107,211 - -0.1 1,107,211 - -0.4 1,107,211 - +0.0 1,107,230 + +3.1 1,107,490 + SMa1951 0.72 -0.3 1,107,490 + SMa1951 0.72 +0.0 1,107,684 - -0.1 1,107,770 - +0.9 1,107,824 + SMa1952 0.16 -0.0 1,107,887 + SMa1952 0.24 +1.3 1,107,888 - SMa1952 0.24 +0.1 1,108,087 - SMa1952 0.47 +0.5 1,108,158 + SMa1952 0.56 -0.0 1,108,158 + SMa1952 0.56 +0.6 1,108,158 + SMa1952 0.56 +1.1 1,108,159 - SMa1952 0.56 +1.1 1,108,605 - -0.2 1,108,645 + -1.1 1,108,646 - -0.4 1,108,646 - -0.2 1,108,646 - +0.5 1,108,653 + -0.3 1,108,691 + -0.5 1,108,691 + -0.4 1,108,692 - -1.3 1,108,693 - -0.4 1,108,754 + -0.8 1,108,755 - +0.3 1,108,755 - -0.4 1,108,755 - +0.4 1,108,760 + +0.0 1,108,761 - -0.7 1,108,761 - -0.7 1,109,001 + SMa1953 0.25 +0.5 1,109,120 + SMa1953 0.37 +0.6 1,109,386 - SMa1953 0.63 -0.1 1,109,386 - SMa1953 0.63 -0.6 1,109,418 + SMa1953 0.66 -0.4 1,109,463 + SMa1953 0.71 +1.1 1,109,465 + SMa1953 0.71 -0.9 1,109,466 + SMa1953 0.71 -0.0 1,109,467 - SMa1953 0.71 -0.0
Or see this region's nucleotide sequence