Experiment: 6-Pentyl-2H-pyran-2-one 0.385649 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20709 and SM_b20710 are separated by 495 nucleotides SM_b20710 and SM_b20711 are separated by 202 nucleotides
SM_b20709: SM_b20709 - 3-methyladenine DNA glycosylase, at 1,511,135 to 1,511,692
_b20709
SM_b20710: SM_b20710 - dehydrogenase, at 1,512,188 to 1,513,075
_b20710
SM_b20711: SM_b20711 - hypothetical protein, at 1,513,278 to 1,514,090
_b20711
Position (kb)
1512
1513
1514 Strain fitness (log2 ratio)
-1
0
1 at 1511.241 kb on + strand, within SM_b20709 at 1511.342 kb on + strand, within SM_b20709 at 1511.342 kb on + strand, within SM_b20709 at 1511.342 kb on + strand, within SM_b20709 at 1511.343 kb on - strand, within SM_b20709 at 1511.343 kb on - strand, within SM_b20709 at 1511.343 kb on - strand, within SM_b20709 at 1511.343 kb on - strand, within SM_b20709 at 1511.343 kb on - strand, within SM_b20709 at 1511.349 kb on - strand, within SM_b20709 at 1511.349 kb on - strand, within SM_b20709 at 1511.349 kb on - strand, within SM_b20709 at 1511.349 kb on - strand, within SM_b20709 at 1511.439 kb on + strand, within SM_b20709 at 1511.481 kb on + strand, within SM_b20709 at 1511.481 kb on + strand, within SM_b20709 at 1511.482 kb on - strand, within SM_b20709 at 1511.482 kb on - strand, within SM_b20709 at 1511.896 kb on + strand at 1512.162 kb on + strand at 1512.163 kb on - strand at 1512.163 kb on - strand at 1512.163 kb on - strand at 1512.185 kb on + strand at 1512.186 kb on - strand at 1512.186 kb on - strand at 1512.204 kb on + strand at 1512.204 kb on + strand at 1512.205 kb on - strand at 1512.205 kb on - strand at 1512.205 kb on - strand at 1512.535 kb on + strand, within SM_b20710 at 1512.536 kb on - strand, within SM_b20710 at 1512.536 kb on - strand, within SM_b20710 at 1512.536 kb on - strand, within SM_b20710 at 1512.723 kb on + strand, within SM_b20710 at 1512.724 kb on - strand, within SM_b20710 at 1512.840 kb on - strand, within SM_b20710 at 1512.840 kb on - strand, within SM_b20710 at 1512.923 kb on + strand, within SM_b20710 at 1512.923 kb on + strand, within SM_b20710 at 1512.923 kb on + strand, within SM_b20710 at 1512.923 kb on + strand, within SM_b20710 at 1512.936 kb on - strand, within SM_b20710 at 1513.025 kb on + strand at 1513.026 kb on - strand at 1513.033 kb on + strand at 1513.034 kb on - strand at 1513.034 kb on - strand at 1513.307 kb on + strand at 1513.307 kb on + strand at 1513.308 kb on - strand at 1513.308 kb on - strand at 1513.635 kb on - strand, within SM_b20711 at 1513.983 kb on + strand, within SM_b20711 at 1514.070 kb on + strand at 1514.070 kb on + strand at 1514.070 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.385649 mM remove 1,511,241 + SM_b20709 0.19 +0.3 1,511,342 + SM_b20709 0.37 -1.3 1,511,342 + SM_b20709 0.37 -1.1 1,511,342 + SM_b20709 0.37 -0.4 1,511,343 - SM_b20709 0.37 +0.7 1,511,343 - SM_b20709 0.37 +0.6 1,511,343 - SM_b20709 0.37 +0.5 1,511,343 - SM_b20709 0.37 +0.3 1,511,343 - SM_b20709 0.37 +0.1 1,511,349 - SM_b20709 0.38 -0.2 1,511,349 - SM_b20709 0.38 +0.7 1,511,349 - SM_b20709 0.38 -0.1 1,511,349 - SM_b20709 0.38 -0.1 1,511,439 + SM_b20709 0.54 +0.2 1,511,481 + SM_b20709 0.62 +0.4 1,511,481 + SM_b20709 0.62 -0.6 1,511,482 - SM_b20709 0.62 -0.1 1,511,482 - SM_b20709 0.62 +0.2 1,511,896 + -0.4 1,512,162 + -1.0 1,512,163 - -0.1 1,512,163 - -0.6 1,512,163 - +0.8 1,512,185 + -0.4 1,512,186 - +0.3 1,512,186 - -1.0 1,512,204 + +0.6 1,512,204 + +0.2 1,512,205 - -1.1 1,512,205 - -0.0 1,512,205 - +0.3 1,512,535 + SM_b20710 0.39 +0.4 1,512,536 - SM_b20710 0.39 +0.0 1,512,536 - SM_b20710 0.39 +0.5 1,512,536 - SM_b20710 0.39 +0.4 1,512,723 + SM_b20710 0.60 +0.5 1,512,724 - SM_b20710 0.60 +0.3 1,512,840 - SM_b20710 0.73 +0.0 1,512,840 - SM_b20710 0.73 +1.1 1,512,923 + SM_b20710 0.83 +1.3 1,512,923 + SM_b20710 0.83 +0.3 1,512,923 + SM_b20710 0.83 +0.2 1,512,923 + SM_b20710 0.83 +0.1 1,512,936 - SM_b20710 0.84 -0.8 1,513,025 + -0.7 1,513,026 - +0.4 1,513,033 + +1.1 1,513,034 - -0.2 1,513,034 - -0.5 1,513,307 + -0.0 1,513,307 + -0.1 1,513,308 - -0.1 1,513,308 - +0.1 1,513,635 - SM_b20711 0.44 -0.4 1,513,983 + SM_b20711 0.87 -1.1 1,514,070 + -0.2 1,514,070 + -0.4 1,514,070 + -0.1
Or see this region's nucleotide sequence