Experiment: 6-Pentyl-2H-pyran-2-one 0.385649 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20275 and SM_b20276 are separated by 91 nucleotides SM_b20276 and SM_b20277 overlap by 4 nucleotides
SM_b20275: SM_b20275 - hypothetical protein, at 279,463 to 280,323
_b20275
SM_b20276: SM_b20276 - transcriptional regulator, at 280,415 to 281,305
_b20276
SM_b20277: SM_b20277 - hypothetical protein, at 281,302 to 282,645
_b20277
Position (kb) 280
281
282 Strain fitness (log2 ratio) -1
0
1 at 279.783 kb on + strand, within SM_b20275 at 279.797 kb on - strand, within SM_b20275 at 279.800 kb on + strand, within SM_b20275 at 279.800 kb on + strand, within SM_b20275 at 279.800 kb on + strand, within SM_b20275 at 279.801 kb on - strand, within SM_b20275 at 279.801 kb on - strand, within SM_b20275 at 280.037 kb on + strand, within SM_b20275 at 280.038 kb on - strand, within SM_b20275 at 280.406 kb on - strand at 280.494 kb on - strand at 280.495 kb on + strand at 280.610 kb on + strand, within SM_b20276 at 280.611 kb on - strand, within SM_b20276 at 280.611 kb on - strand, within SM_b20276 at 280.631 kb on + strand, within SM_b20276 at 280.884 kb on - strand, within SM_b20276 at 280.885 kb on + strand, within SM_b20276 at 280.885 kb on + strand, within SM_b20276 at 280.886 kb on - strand, within SM_b20276 at 281.005 kb on + strand, within SM_b20276 at 281.033 kb on + strand at 281.033 kb on + strand, within SM_b20276 at 281.034 kb on - strand, within SM_b20276 at 281.034 kb on - strand, within SM_b20276 at 281.396 kb on - strand at 281.484 kb on + strand, within SM_b20277 at 281.487 kb on - strand, within SM_b20277 at 281.487 kb on - strand, within SM_b20277 at 281.487 kb on - strand, within SM_b20277 at 281.487 kb on - strand, within SM_b20277 at 281.491 kb on + strand, within SM_b20277 at 281.491 kb on + strand, within SM_b20277 at 281.491 kb on + strand, within SM_b20277 at 281.491 kb on + strand, within SM_b20277 at 281.491 kb on + strand, within SM_b20277 at 281.491 kb on + strand, within SM_b20277 at 281.492 kb on - strand, within SM_b20277 at 281.492 kb on - strand, within SM_b20277 at 281.492 kb on - strand, within SM_b20277 at 281.492 kb on - strand, within SM_b20277 at 281.581 kb on + strand, within SM_b20277 at 281.582 kb on - strand, within SM_b20277 at 281.695 kb on + strand, within SM_b20277 at 281.695 kb on + strand, within SM_b20277 at 281.695 kb on + strand, within SM_b20277 at 281.696 kb on - strand, within SM_b20277 at 281.696 kb on - strand, within SM_b20277 at 281.839 kb on + strand, within SM_b20277 at 281.840 kb on - strand, within SM_b20277 at 281.998 kb on + strand, within SM_b20277 at 281.998 kb on + strand, within SM_b20277 at 281.999 kb on - strand, within SM_b20277 at 282.143 kb on + strand, within SM_b20277 at 282.143 kb on + strand, within SM_b20277 at 282.207 kb on + strand, within SM_b20277 at 282.207 kb on + strand, within SM_b20277 at 282.208 kb on - strand, within SM_b20277 at 282.208 kb on - strand, within SM_b20277 at 282.211 kb on + strand, within SM_b20277 at 282.211 kb on + strand, within SM_b20277 at 282.211 kb on + strand, within SM_b20277 at 282.212 kb on - strand, within SM_b20277 at 282.212 kb on - strand, within SM_b20277 at 282.212 kb on - strand, within SM_b20277 at 282.214 kb on - strand, within SM_b20277
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.385649 mM remove 279,783 + SM_b20275 0.37 -0.3 279,797 - SM_b20275 0.39 +0.6 279,800 + SM_b20275 0.39 -0.8 279,800 + SM_b20275 0.39 +0.3 279,800 + SM_b20275 0.39 +1.1 279,801 - SM_b20275 0.39 +1.3 279,801 - SM_b20275 0.39 -0.4 280,037 + SM_b20275 0.67 +0.5 280,038 - SM_b20275 0.67 +0.1 280,406 - -0.0 280,494 - -0.1 280,495 + -1.2 280,610 + SM_b20276 0.22 -0.9 280,611 - SM_b20276 0.22 -0.1 280,611 - SM_b20276 0.22 -0.2 280,631 + SM_b20276 0.24 -0.5 280,884 - SM_b20276 0.53 +0.0 280,885 + SM_b20276 0.53 -0.4 280,885 + SM_b20276 0.53 +0.2 280,886 - SM_b20276 0.53 -1.1 281,005 + SM_b20276 0.66 -0.1 281,033 + +1.1 281,033 + SM_b20276 0.69 -0.4 281,034 - SM_b20276 0.69 +0.4 281,034 - SM_b20276 0.69 -1.0 281,396 - +0.5 281,484 + SM_b20277 0.14 +0.5 281,487 - SM_b20277 0.14 -0.9 281,487 - SM_b20277 0.14 -0.0 281,487 - SM_b20277 0.14 -0.9 281,487 - SM_b20277 0.14 +0.7 281,491 + SM_b20277 0.14 +0.5 281,491 + SM_b20277 0.14 +0.1 281,491 + SM_b20277 0.14 -0.9 281,491 + SM_b20277 0.14 -0.1 281,491 + SM_b20277 0.14 +0.8 281,491 + SM_b20277 0.14 +0.4 281,492 - SM_b20277 0.14 -1.0 281,492 - SM_b20277 0.14 -0.5 281,492 - SM_b20277 0.14 -0.5 281,492 - SM_b20277 0.14 +0.3 281,581 + SM_b20277 0.21 -0.1 281,582 - SM_b20277 0.21 -0.4 281,695 + SM_b20277 0.29 +1.5 281,695 + SM_b20277 0.29 -0.5 281,695 + SM_b20277 0.29 +0.1 281,696 - SM_b20277 0.29 +0.1 281,696 - SM_b20277 0.29 +1.3 281,839 + SM_b20277 0.40 -0.1 281,840 - SM_b20277 0.40 -0.2 281,998 + SM_b20277 0.52 +0.2 281,998 + SM_b20277 0.52 +0.2 281,999 - SM_b20277 0.52 -0.6 282,143 + SM_b20277 0.63 -0.2 282,143 + SM_b20277 0.63 +1.1 282,207 + SM_b20277 0.67 +0.4 282,207 + SM_b20277 0.67 -0.1 282,208 - SM_b20277 0.67 -0.2 282,208 - SM_b20277 0.67 +0.3 282,211 + SM_b20277 0.68 +0.9 282,211 + SM_b20277 0.68 +0.2 282,211 + SM_b20277 0.68 -0.0 282,212 - SM_b20277 0.68 -0.4 282,212 - SM_b20277 0.68 +0.2 282,212 - SM_b20277 0.68 +1.1 282,214 - SM_b20277 0.68 -0.8
Or see this region's nucleotide sequence