Experiment: 6-Pentyl-2H-pyran-2-one 0.385649 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03170 and SMc03171 are separated by 166 nucleotides SMc03171 and SMc03172 are separated by 267 nucleotides
SMc03170: SMc03170 - transcriptional regulator, at 3,131,057 to 3,131,896
SMc03170
SMc03171: SMc03171 - hypothetical protein, at 3,132,063 to 3,132,815
SMc03171
SMc03172: SMc03172 - glutamyl-tRNA synthetase, at 3,133,083 to 3,134,540
SMc03172
Position (kb)
3132
3133 Strain fitness (log2 ratio)
-1
0
1 at 3131.110 kb on + strand at 3131.112 kb on + strand at 3131.113 kb on - strand at 3131.113 kb on - strand at 3131.113 kb on - strand at 3131.113 kb on - strand at 3131.113 kb on - strand at 3131.113 kb on - strand at 3131.204 kb on + strand, within SMc03170 at 3131.204 kb on + strand, within SMc03170 at 3131.204 kb on + strand, within SMc03170 at 3131.204 kb on + strand, within SMc03170 at 3131.205 kb on - strand, within SMc03170 at 3131.205 kb on - strand, within SMc03170 at 3131.205 kb on - strand, within SMc03170 at 3131.205 kb on - strand, within SMc03170 at 3131.205 kb on - strand, within SMc03170 at 3131.205 kb on - strand, within SMc03170 at 3131.224 kb on - strand, within SMc03170 at 3131.292 kb on - strand, within SMc03170 at 3131.489 kb on + strand, within SMc03170 at 3131.489 kb on + strand, within SMc03170 at 3131.489 kb on + strand, within SMc03170 at 3131.489 kb on + strand, within SMc03170 at 3131.489 kb on + strand, within SMc03170 at 3131.489 kb on + strand, within SMc03170 at 3131.489 kb on + strand, within SMc03170 at 3131.489 kb on + strand, within SMc03170 at 3131.490 kb on - strand, within SMc03170 at 3131.490 kb on - strand, within SMc03170 at 3131.490 kb on - strand, within SMc03170 at 3131.543 kb on + strand, within SMc03170 at 3131.544 kb on - strand, within SMc03170 at 3131.544 kb on - strand, within SMc03170 at 3131.576 kb on - strand, within SMc03170 at 3131.627 kb on + strand, within SMc03170 at 3131.646 kb on + strand, within SMc03170 at 3131.647 kb on - strand, within SMc03170 at 3131.828 kb on + strand at 3132.012 kb on + strand at 3132.127 kb on + strand at 3132.127 kb on + strand at 3132.717 kb on + strand, within SMc03171 at 3132.717 kb on + strand, within SMc03171 at 3132.717 kb on + strand, within SMc03171 at 3132.718 kb on - strand, within SMc03171 at 3132.718 kb on - strand, within SMc03171 at 3132.718 kb on - strand, within SMc03171 at 3132.723 kb on + strand, within SMc03171 at 3132.723 kb on + strand, within SMc03171 at 3132.934 kb on + strand at 3132.934 kb on + strand at 3132.934 kb on + strand at 3132.934 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.385649 mM remove 3,131,110 + +1.0 3,131,112 + -0.0 3,131,113 - -0.4 3,131,113 - -0.5 3,131,113 - +0.2 3,131,113 - +1.4 3,131,113 - -0.0 3,131,113 - -0.6 3,131,204 + SMc03170 0.17 +0.2 3,131,204 + SMc03170 0.17 +0.8 3,131,204 + SMc03170 0.17 +0.2 3,131,204 + SMc03170 0.17 -0.3 3,131,205 - SMc03170 0.18 +1.0 3,131,205 - SMc03170 0.18 -0.7 3,131,205 - SMc03170 0.18 -0.8 3,131,205 - SMc03170 0.18 +1.0 3,131,205 - SMc03170 0.18 -0.9 3,131,205 - SMc03170 0.18 -1.0 3,131,224 - SMc03170 0.20 +0.0 3,131,292 - SMc03170 0.28 -0.0 3,131,489 + SMc03170 0.51 -0.3 3,131,489 + SMc03170 0.51 -0.1 3,131,489 + SMc03170 0.51 +0.2 3,131,489 + SMc03170 0.51 -0.1 3,131,489 + SMc03170 0.51 +0.2 3,131,489 + SMc03170 0.51 +0.1 3,131,489 + SMc03170 0.51 +0.0 3,131,489 + SMc03170 0.51 -1.7 3,131,490 - SMc03170 0.52 +1.4 3,131,490 - SMc03170 0.52 -0.2 3,131,490 - SMc03170 0.52 -0.5 3,131,543 + SMc03170 0.58 -1.4 3,131,544 - SMc03170 0.58 -0.5 3,131,544 - SMc03170 0.58 +0.2 3,131,576 - SMc03170 0.62 -0.2 3,131,627 + SMc03170 0.68 +0.0 3,131,646 + SMc03170 0.70 +0.0 3,131,647 - SMc03170 0.70 -0.3 3,131,828 + +1.2 3,132,012 + +0.2 3,132,127 + +1.6 3,132,127 + -0.4 3,132,717 + SMc03171 0.87 +0.4 3,132,717 + SMc03171 0.87 +0.1 3,132,717 + SMc03171 0.87 +0.0 3,132,718 - SMc03171 0.87 +0.6 3,132,718 - SMc03171 0.87 +1.1 3,132,718 - SMc03171 0.87 +0.0 3,132,723 + SMc03171 0.88 -0.6 3,132,723 + SMc03171 0.88 +0.0 3,132,934 + -0.5 3,132,934 + +0.1 3,132,934 + +1.1 3,132,934 + +0.5
Or see this region's nucleotide sequence