Experiment: 6-Pentyl-2H-pyran-2-one 0.385649 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02034 and SMc02035 are separated by 227 nucleotides SMc02035 and SMc02036 are separated by 151 nucleotides
SMc02034: SMc02034 - oxidoreductase, at 2,740,370 to 2,741,143
SMc02034
SMc02035: SMc02035 - oxidoreductase, at 2,741,371 to 2,742,411
SMc02035
SMc02036: SMc02036 - transcriptional regulator, at 2,742,563 to 2,743,270
SMc02036
Position (kb)
2741
2742
2743 Strain fitness (log2 ratio)
-1
0
1
2 at 2740.372 kb on - strand at 2740.381 kb on + strand at 2740.381 kb on + strand at 2740.381 kb on + strand at 2740.381 kb on + strand at 2740.382 kb on - strand at 2740.382 kb on - strand at 2740.383 kb on + strand at 2740.516 kb on - strand, within SMc02034 at 2740.563 kb on + strand, within SMc02034 at 2740.563 kb on + strand, within SMc02034 at 2740.563 kb on + strand, within SMc02034 at 2740.564 kb on - strand, within SMc02034 at 2740.564 kb on - strand, within SMc02034 at 2740.564 kb on - strand, within SMc02034 at 2740.564 kb on - strand, within SMc02034 at 2740.564 kb on - strand, within SMc02034 at 2740.660 kb on - strand, within SMc02034 at 2740.660 kb on - strand, within SMc02034 at 2740.744 kb on + strand, within SMc02034 at 2740.744 kb on + strand, within SMc02034 at 2740.744 kb on + strand, within SMc02034 at 2740.745 kb on - strand, within SMc02034 at 2740.745 kb on - strand, within SMc02034 at 2740.745 kb on - strand, within SMc02034 at 2740.745 kb on - strand, within SMc02034 at 2740.745 kb on - strand, within SMc02034 at 2740.745 kb on - strand, within SMc02034 at 2740.745 kb on - strand, within SMc02034 at 2740.796 kb on + strand, within SMc02034 at 2740.796 kb on + strand, within SMc02034 at 2740.797 kb on - strand, within SMc02034 at 2740.968 kb on + strand, within SMc02034 at 2740.968 kb on + strand, within SMc02034 at 2740.969 kb on - strand, within SMc02034 at 2740.969 kb on - strand, within SMc02034 at 2741.139 kb on + strand at 2741.140 kb on - strand at 2741.143 kb on + strand at 2741.143 kb on + strand at 2741.143 kb on + strand at 2741.143 kb on + strand at 2741.144 kb on - strand at 2741.144 kb on - strand at 2741.144 kb on - strand at 2741.205 kb on - strand at 2741.205 kb on - strand at 2741.313 kb on + strand at 2741.313 kb on + strand at 2741.313 kb on + strand at 2741.695 kb on - strand, within SMc02035 at 2741.867 kb on + strand, within SMc02035 at 2741.867 kb on + strand, within SMc02035 at 2742.037 kb on - strand, within SMc02035 at 2742.159 kb on - strand, within SMc02035 at 2742.275 kb on + strand, within SMc02035 at 2742.424 kb on + strand at 2742.424 kb on + strand at 2742.425 kb on - strand at 2742.425 kb on - strand at 2742.441 kb on + strand at 2742.441 kb on + strand at 2742.441 kb on + strand at 2742.441 kb on + strand at 2742.441 kb on + strand at 2742.441 kb on + strand at 2742.442 kb on - strand at 2742.454 kb on + strand at 2742.455 kb on - strand at 2742.508 kb on + strand at 2742.509 kb on - strand at 2742.509 kb on - strand at 2743.004 kb on + strand, within SMc02036 at 2743.020 kb on - strand, within SMc02036 at 2743.192 kb on + strand, within SMc02036 at 2743.194 kb on - strand, within SMc02036
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.385649 mM remove 2,740,372 - +0.3 2,740,381 + +0.3 2,740,381 + -0.3 2,740,381 + +0.2 2,740,381 + +0.1 2,740,382 - +0.4 2,740,382 - +0.5 2,740,383 + +0.1 2,740,516 - SMc02034 0.19 -0.2 2,740,563 + SMc02034 0.25 -0.7 2,740,563 + SMc02034 0.25 -0.2 2,740,563 + SMc02034 0.25 -0.2 2,740,564 - SMc02034 0.25 -0.3 2,740,564 - SMc02034 0.25 +0.2 2,740,564 - SMc02034 0.25 +0.5 2,740,564 - SMc02034 0.25 +0.8 2,740,564 - SMc02034 0.25 -0.1 2,740,660 - SMc02034 0.37 -0.7 2,740,660 - SMc02034 0.37 -0.8 2,740,744 + SMc02034 0.48 +0.6 2,740,744 + SMc02034 0.48 +0.6 2,740,744 + SMc02034 0.48 +0.5 2,740,745 - SMc02034 0.48 +0.0 2,740,745 - SMc02034 0.48 -0.3 2,740,745 - SMc02034 0.48 +0.2 2,740,745 - SMc02034 0.48 +0.4 2,740,745 - SMc02034 0.48 +0.1 2,740,745 - SMc02034 0.48 +0.5 2,740,745 - SMc02034 0.48 -0.4 2,740,796 + SMc02034 0.55 -0.2 2,740,796 + SMc02034 0.55 -0.4 2,740,797 - SMc02034 0.55 -0.1 2,740,968 + SMc02034 0.77 +1.2 2,740,968 + SMc02034 0.77 +0.3 2,740,969 - SMc02034 0.77 +0.2 2,740,969 - SMc02034 0.77 +0.9 2,741,139 + +0.3 2,741,140 - +0.8 2,741,143 + +0.2 2,741,143 + +2.3 2,741,143 + +0.3 2,741,143 + +0.3 2,741,144 - -0.2 2,741,144 - +0.4 2,741,144 - +0.7 2,741,205 - +0.1 2,741,205 - -0.1 2,741,313 + -0.1 2,741,313 + -0.3 2,741,313 + -0.0 2,741,695 - SMc02035 0.31 -0.1 2,741,867 + SMc02035 0.48 +0.0 2,741,867 + SMc02035 0.48 +1.9 2,742,037 - SMc02035 0.64 +0.9 2,742,159 - SMc02035 0.76 +0.7 2,742,275 + SMc02035 0.87 -0.9 2,742,424 + -1.1 2,742,424 + -0.3 2,742,425 - +0.4 2,742,425 - +0.3 2,742,441 + +0.2 2,742,441 + +0.1 2,742,441 + -0.3 2,742,441 + +0.5 2,742,441 + -0.8 2,742,441 + -0.1 2,742,442 - -0.2 2,742,454 + +0.3 2,742,455 - +0.6 2,742,508 + +1.2 2,742,509 - +0.1 2,742,509 - +0.3 2,743,004 + SMc02036 0.62 -0.4 2,743,020 - SMc02036 0.65 +0.4 2,743,192 + SMc02036 0.89 +0.6 2,743,194 - SMc02036 0.89 +1.9
Or see this region's nucleotide sequence