Experiment: 6-Pentyl-2H-pyran-2-one 0.385649 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1283 and SMa1285 are separated by 365 nucleotides SMa1285 and SMa1288 overlap by 4 nucleotides
SMa1283: SMa1283 - NnrU family protein, at 700,220 to 700,906
SMa1283
SMa1285: SMa1285 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, at 701,272 to 701,874
SMa1285
SMa1288: SMa1288 - Carboxylase, at 701,871 to 703,322
SMa1288
Position (kb) 701
702 Strain fitness (log2 ratio) -1
0
1
2
3 at 700.337 kb on + strand, within SMa1283 at 700.376 kb on + strand, within SMa1283 at 700.671 kb on + strand, within SMa1283 at 700.671 kb on + strand, within SMa1283 at 700.672 kb on - strand, within SMa1283 at 700.672 kb on - strand, within SMa1283 at 700.672 kb on - strand, within SMa1283 at 700.675 kb on + strand, within SMa1283 at 700.675 kb on + strand, within SMa1283 at 700.676 kb on - strand, within SMa1283 at 700.676 kb on - strand, within SMa1283 at 700.904 kb on + strand at 700.904 kb on + strand at 700.904 kb on + strand at 700.905 kb on - strand at 700.905 kb on - strand at 701.104 kb on + strand at 701.273 kb on + strand at 701.273 kb on + strand at 701.274 kb on - strand at 701.274 kb on - strand at 701.408 kb on + strand, within SMa1285 at 701.408 kb on + strand, within SMa1285 at 701.408 kb on + strand, within SMa1285 at 701.408 kb on + strand, within SMa1285 at 701.408 kb on + strand, within SMa1285 at 701.678 kb on + strand, within SMa1285 at 702.046 kb on + strand, within SMa1288 at 702.047 kb on - strand, within SMa1288 at 702.047 kb on - strand, within SMa1288 at 702.165 kb on + strand, within SMa1288 at 702.173 kb on + strand, within SMa1288 at 702.174 kb on - strand, within SMa1288 at 702.174 kb on - strand, within SMa1288 at 702.216 kb on - strand, within SMa1288 at 702.268 kb on + strand, within SMa1288 at 702.292 kb on + strand, within SMa1288 at 702.292 kb on + strand, within SMa1288 at 702.292 kb on + strand, within SMa1288 at 702.292 kb on + strand, within SMa1288 at 702.293 kb on - strand, within SMa1288 at 702.294 kb on + strand, within SMa1288 at 702.294 kb on + strand, within SMa1288 at 702.295 kb on - strand, within SMa1288 at 702.295 kb on - strand, within SMa1288 at 702.406 kb on + strand, within SMa1288 at 702.406 kb on + strand, within SMa1288 at 702.407 kb on - strand, within SMa1288 at 702.407 kb on - strand, within SMa1288 at 702.407 kb on - strand, within SMa1288 at 702.407 kb on - strand, within SMa1288 at 702.472 kb on + strand, within SMa1288 at 702.472 kb on + strand, within SMa1288 at 702.472 kb on + strand, within SMa1288 at 702.472 kb on + strand, within SMa1288 at 702.472 kb on + strand, within SMa1288 at 702.472 kb on + strand, within SMa1288 at 702.473 kb on - strand, within SMa1288 at 702.473 kb on - strand, within SMa1288 at 702.494 kb on - strand, within SMa1288 at 702.814 kb on + strand, within SMa1288 at 702.814 kb on + strand, within SMa1288
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.385649 mM remove 700,337 + SMa1283 0.17 -1.7 700,376 + SMa1283 0.23 -0.4 700,671 + SMa1283 0.66 +1.0 700,671 + SMa1283 0.66 +1.3 700,672 - SMa1283 0.66 -0.4 700,672 - SMa1283 0.66 +0.3 700,672 - SMa1283 0.66 -0.7 700,675 + SMa1283 0.66 +1.9 700,675 + SMa1283 0.66 -0.2 700,676 - SMa1283 0.66 +0.0 700,676 - SMa1283 0.66 -0.6 700,904 + -0.4 700,904 + +1.0 700,904 + -0.1 700,905 - +0.2 700,905 - -0.5 701,104 + -0.5 701,273 + +0.3 701,273 + +0.6 701,274 - +0.3 701,274 - -0.3 701,408 + SMa1285 0.23 -1.4 701,408 + SMa1285 0.23 +0.3 701,408 + SMa1285 0.23 +0.3 701,408 + SMa1285 0.23 +0.1 701,408 + SMa1285 0.23 +1.5 701,678 + SMa1285 0.67 +0.3 702,046 + SMa1288 0.12 -1.5 702,047 - SMa1288 0.12 -0.4 702,047 - SMa1288 0.12 -0.1 702,165 + SMa1288 0.20 -0.1 702,173 + SMa1288 0.21 +0.9 702,174 - SMa1288 0.21 +0.2 702,174 - SMa1288 0.21 -0.4 702,216 - SMa1288 0.24 -0.7 702,268 + SMa1288 0.27 +0.5 702,292 + SMa1288 0.29 -0.1 702,292 + SMa1288 0.29 -0.1 702,292 + SMa1288 0.29 +0.5 702,292 + SMa1288 0.29 -0.3 702,293 - SMa1288 0.29 -0.4 702,294 + SMa1288 0.29 +0.3 702,294 + SMa1288 0.29 -0.9 702,295 - SMa1288 0.29 +0.3 702,295 - SMa1288 0.29 +0.3 702,406 + SMa1288 0.37 +1.9 702,406 + SMa1288 0.37 -0.4 702,407 - SMa1288 0.37 +0.4 702,407 - SMa1288 0.37 -0.3 702,407 - SMa1288 0.37 +1.1 702,407 - SMa1288 0.37 +0.4 702,472 + SMa1288 0.41 +2.9 702,472 + SMa1288 0.41 +0.1 702,472 + SMa1288 0.41 -0.4 702,472 + SMa1288 0.41 -0.1 702,472 + SMa1288 0.41 +0.5 702,472 + SMa1288 0.41 +0.1 702,473 - SMa1288 0.41 +1.5 702,473 - SMa1288 0.41 +0.2 702,494 - SMa1288 0.43 -0.1 702,814 + SMa1288 0.65 +0.8 702,814 + SMa1288 0.65 -0.2
Or see this region's nucleotide sequence