Experiment: 6-Pentyl-2H-pyran-2-one 0.385649 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21643 and SM_b21644 are separated by 20 nucleotides SM_b21644 and SM_b21645 are separated by 11 nucleotides
SM_b21643: SM_b21643 - alpha-galactosidase (melibiase) protein, at 1,671,025 to 1,672,398
_b21643
SM_b21644: SM_b21644 - ABC transporter for D-Raffinose, ATPase component (from data) , at 1,672,419 to 1,674,089
_b21644
SM_b21645: SM_b21645 - ABC transporter for D-Raffinose, permease component 1 (from data) , at 1,674,101 to 1,675,228
_b21645
Position (kb)
1672
1673
1674
1675 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1671.422 kb on + strand, within SM_b21643 at 1671.422 kb on + strand, within SM_b21643 at 1671.623 kb on + strand, within SM_b21643 at 1671.647 kb on + strand, within SM_b21643 at 1671.647 kb on + strand, within SM_b21643 at 1671.648 kb on - strand, within SM_b21643 at 1671.780 kb on - strand, within SM_b21643 at 1671.953 kb on + strand, within SM_b21643 at 1671.954 kb on - strand, within SM_b21643 at 1671.954 kb on - strand, within SM_b21643 at 1671.954 kb on - strand at 1672.093 kb on - strand, within SM_b21643 at 1672.324 kb on + strand at 1672.325 kb on - strand at 1672.377 kb on + strand at 1672.403 kb on + strand at 1672.404 kb on - strand at 1672.404 kb on - strand at 1672.416 kb on - strand at 1672.588 kb on + strand, within SM_b21644 at 1672.588 kb on + strand, within SM_b21644 at 1672.869 kb on + strand, within SM_b21644 at 1672.869 kb on + strand, within SM_b21644 at 1672.869 kb on + strand, within SM_b21644 at 1672.869 kb on + strand, within SM_b21644 at 1672.870 kb on - strand, within SM_b21644 at 1672.870 kb on - strand, within SM_b21644 at 1672.997 kb on - strand, within SM_b21644 at 1672.997 kb on - strand, within SM_b21644 at 1673.174 kb on + strand, within SM_b21644 at 1673.273 kb on + strand, within SM_b21644 at 1673.274 kb on - strand, within SM_b21644 at 1673.347 kb on + strand, within SM_b21644 at 1673.348 kb on - strand, within SM_b21644 at 1673.348 kb on - strand, within SM_b21644 at 1673.572 kb on + strand, within SM_b21644 at 1673.704 kb on + strand, within SM_b21644 at 1673.812 kb on + strand, within SM_b21644 at 1673.812 kb on + strand, within SM_b21644 at 1673.813 kb on - strand, within SM_b21644 at 1673.841 kb on - strand, within SM_b21644 at 1673.932 kb on + strand at 1673.991 kb on + strand at 1674.198 kb on + strand at 1674.199 kb on - strand at 1674.217 kb on - strand, within SM_b21645 at 1674.377 kb on + strand, within SM_b21645 at 1674.424 kb on - strand, within SM_b21645 at 1674.424 kb on - strand, within SM_b21645 at 1674.791 kb on - strand, within SM_b21645 at 1674.846 kb on + strand, within SM_b21645 at 1674.847 kb on - strand, within SM_b21645 at 1674.891 kb on + strand, within SM_b21645 at 1674.954 kb on + strand, within SM_b21645 at 1674.955 kb on - strand, within SM_b21645
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.385649 mM remove 1,671,422 + SM_b21643 0.29 +0.8 1,671,422 + SM_b21643 0.29 -0.7 1,671,623 + SM_b21643 0.44 +0.3 1,671,647 + SM_b21643 0.45 +1.8 1,671,647 + SM_b21643 0.45 +1.5 1,671,648 - SM_b21643 0.45 -0.4 1,671,780 - SM_b21643 0.55 +0.0 1,671,953 + SM_b21643 0.68 -0.5 1,671,954 - SM_b21643 0.68 -0.2 1,671,954 - SM_b21643 0.68 +0.9 1,671,954 - +1.4 1,672,093 - SM_b21643 0.78 -0.5 1,672,324 + -0.3 1,672,325 - +0.7 1,672,377 + -0.2 1,672,403 + -0.4 1,672,404 - -1.0 1,672,404 - +0.1 1,672,416 - -0.3 1,672,588 + SM_b21644 0.10 -0.8 1,672,588 + SM_b21644 0.10 -0.3 1,672,869 + SM_b21644 0.27 -0.2 1,672,869 + SM_b21644 0.27 -0.3 1,672,869 + SM_b21644 0.27 +0.1 1,672,869 + SM_b21644 0.27 -0.9 1,672,870 - SM_b21644 0.27 +0.1 1,672,870 - SM_b21644 0.27 +0.7 1,672,997 - SM_b21644 0.35 -0.2 1,672,997 - SM_b21644 0.35 -0.5 1,673,174 + SM_b21644 0.45 -0.9 1,673,273 + SM_b21644 0.51 -0.9 1,673,274 - SM_b21644 0.51 -0.5 1,673,347 + SM_b21644 0.56 -0.3 1,673,348 - SM_b21644 0.56 +0.3 1,673,348 - SM_b21644 0.56 -0.1 1,673,572 + SM_b21644 0.69 -0.8 1,673,704 + SM_b21644 0.77 -0.2 1,673,812 + SM_b21644 0.83 -0.5 1,673,812 + SM_b21644 0.83 -0.6 1,673,813 - SM_b21644 0.83 -0.8 1,673,841 - SM_b21644 0.85 -0.3 1,673,932 + -0.6 1,673,991 + -0.2 1,674,198 + +1.3 1,674,199 - +0.4 1,674,217 - SM_b21645 0.10 +0.8 1,674,377 + SM_b21645 0.24 -0.2 1,674,424 - SM_b21645 0.29 +0.2 1,674,424 - SM_b21645 0.29 +1.2 1,674,791 - SM_b21645 0.61 -2.0 1,674,846 + SM_b21645 0.66 +0.5 1,674,847 - SM_b21645 0.66 +0.6 1,674,891 + SM_b21645 0.70 +1.6 1,674,954 + SM_b21645 0.76 -1.0 1,674,955 - SM_b21645 0.76 +0.1
Or see this region's nucleotide sequence