Experiment: 6-Pentyl-2H-pyran-2-one 0.385649 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03025 and SMc03026 overlap by 4 nucleotides SMc03026 and SMc03027 are separated by 307 nucleotides SMc03027 and SMc03028 are separated by 6 nucleotides
SMc03025: SMc03025 - flagellum-specific ATP synthase, at 722,679 to 724,082
SMc03025
SMc03026: SMc03026 - hypothetical protein, at 724,079 to 724,630
SMc03026
SMc03027: SMc03027 - flagellar basal body rod protein FlgB, at 724,938 to 725,318
SMc03027
SMc03028: SMc03028 - flagellar basal body rod protein FlgC, at 725,325 to 725,744
SMc03028
Position (kb) 724
725 Strain fitness (log2 ratio) -1
0
1 at 723.169 kb on + strand, within SMc03025 at 723.767 kb on - strand, within SMc03025 at 723.934 kb on + strand, within SMc03025 at 723.935 kb on - strand, within SMc03025 at 723.955 kb on - strand at 724.158 kb on + strand, within SMc03026 at 724.158 kb on + strand, within SMc03026 at 724.159 kb on - strand, within SMc03026 at 724.159 kb on - strand at 724.211 kb on + strand, within SMc03026 at 724.212 kb on - strand, within SMc03026 at 724.217 kb on + strand, within SMc03026 at 724.218 kb on - strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.516 kb on + strand, within SMc03026 at 724.517 kb on - strand, within SMc03026 at 724.517 kb on - strand, within SMc03026 at 724.526 kb on - strand, within SMc03026 at 724.828 kb on - strand at 724.863 kb on + strand at 724.863 kb on + strand at 724.864 kb on - strand at 724.864 kb on - strand at 724.909 kb on - strand at 725.202 kb on - strand, within SMc03027 at 725.202 kb on - strand, within SMc03027 at 725.253 kb on + strand, within SMc03027 at 725.316 kb on + strand at 725.317 kb on - strand at 725.317 kb on - strand at 725.349 kb on - strand at 725.621 kb on + strand, within SMc03028
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.385649 mM remove 723,169 + SMc03025 0.35 +0.5 723,767 - SMc03025 0.77 +0.1 723,934 + SMc03025 0.89 -0.2 723,935 - SMc03025 0.89 +1.2 723,955 - +0.1 724,158 + SMc03026 0.14 +0.5 724,158 + SMc03026 0.14 -0.0 724,159 - SMc03026 0.14 -0.1 724,159 - +0.5 724,211 + SMc03026 0.24 -0.1 724,212 - SMc03026 0.24 +0.1 724,217 + SMc03026 0.25 -0.3 724,218 - SMc03026 0.25 -0.5 724,514 + SMc03026 0.79 -0.1 724,514 + SMc03026 0.79 -0.4 724,514 + SMc03026 0.79 -0.2 724,514 + SMc03026 0.79 +0.2 724,514 + SMc03026 0.79 -0.0 724,514 + SMc03026 0.79 -0.1 724,514 + SMc03026 0.79 +0.1 724,514 + SMc03026 0.79 -0.2 724,514 + SMc03026 0.79 +0.6 724,515 - SMc03026 0.79 -0.0 724,515 - SMc03026 0.79 +0.8 724,515 - SMc03026 0.79 -0.2 724,515 - SMc03026 0.79 -0.2 724,515 - SMc03026 0.79 +0.9 724,515 - SMc03026 0.79 -0.7 724,516 + SMc03026 0.79 -0.3 724,517 - SMc03026 0.79 -0.2 724,517 - SMc03026 0.79 +1.3 724,526 - SMc03026 0.81 -0.7 724,828 - -0.5 724,863 + +0.5 724,863 + -0.2 724,864 - +0.0 724,864 - -0.6 724,909 - -0.1 725,202 - SMc03027 0.69 +0.3 725,202 - SMc03027 0.69 +0.1 725,253 + SMc03027 0.83 +0.1 725,316 + +0.5 725,317 - -1.6 725,317 - -0.7 725,349 - +0.2 725,621 + SMc03028 0.70 -0.5
Or see this region's nucleotide sequence