Experiment: 6-Pentyl-2H-pyran-2-one 0.385649 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03022 and SMc03023 are separated by 198 nucleotides SMc03023 and SMc03024 are separated by 1 nucleotides SMc03024 and SMc03025 are separated by 45 nucleotides
SMc03022: SMc03022 - flagellar motor protein MotA, at 720,050 to 720,928
SMc03022
SMc03023: SMc03023 - hypothetical protein, at 721,127 to 721,906
SMc03023
SMc03024: SMc03024 - flagellar basal body rod protein FlgF, at 721,908 to 722,633
SMc03024
SMc03025: SMc03025 - flagellum-specific ATP synthase, at 722,679 to 724,082
SMc03025
Position (kb) 721
722
723 Strain fitness (log2 ratio) -2
-1
0
1
2 at 720.934 kb on + strand at 720.968 kb on + strand at 720.968 kb on + strand at 721.140 kb on - strand at 721.140 kb on - strand at 721.140 kb on - strand at 721.140 kb on - strand at 721.140 kb on - strand at 721.142 kb on - strand at 721.226 kb on + strand, within SMc03023 at 721.226 kb on + strand, within SMc03023 at 721.226 kb on + strand, within SMc03023 at 721.226 kb on + strand, within SMc03023 at 721.227 kb on - strand, within SMc03023 at 721.227 kb on - strand, within SMc03023 at 721.227 kb on - strand, within SMc03023 at 721.230 kb on - strand, within SMc03023 at 721.230 kb on - strand, within SMc03023 at 721.290 kb on - strand, within SMc03023 at 721.295 kb on + strand, within SMc03023 at 721.296 kb on - strand, within SMc03023 at 721.296 kb on - strand, within SMc03023 at 721.332 kb on - strand, within SMc03023 at 721.332 kb on - strand, within SMc03023 at 721.415 kb on + strand, within SMc03023 at 721.508 kb on - strand, within SMc03023 at 721.568 kb on + strand, within SMc03023 at 721.569 kb on - strand, within SMc03023 at 721.604 kb on + strand, within SMc03023 at 721.706 kb on + strand, within SMc03023 at 721.707 kb on - strand, within SMc03023 at 721.923 kb on + strand at 721.923 kb on + strand at 721.924 kb on - strand at 721.982 kb on + strand, within SMc03024 at 722.070 kb on + strand, within SMc03024 at 722.071 kb on - strand, within SMc03024 at 722.071 kb on - strand, within SMc03024 at 722.071 kb on - strand, within SMc03024 at 722.243 kb on - strand, within SMc03024 at 722.377 kb on - strand, within SMc03024 at 722.377 kb on - strand, within SMc03024 at 722.377 kb on - strand, within SMc03024 at 722.410 kb on - strand, within SMc03024 at 722.515 kb on + strand, within SMc03024 at 722.516 kb on - strand, within SMc03024 at 722.516 kb on - strand, within SMc03024 at 722.573 kb on + strand at 722.573 kb on + strand at 722.574 kb on - strand at 722.574 kb on - strand at 722.751 kb on + strand at 722.814 kb on + strand at 722.814 kb on + strand at 722.815 kb on - strand at 722.815 kb on - strand at 722.815 kb on - strand at 722.815 kb on - strand at 723.169 kb on + strand, within SMc03025
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.385649 mM remove 720,934 + -1.7 720,968 + +0.3 720,968 + -0.1 721,140 - -0.2 721,140 - -0.7 721,140 - -0.8 721,140 - +1.0 721,140 - -0.5 721,142 - +0.3 721,226 + SMc03023 0.13 +0.2 721,226 + SMc03023 0.13 +0.4 721,226 + SMc03023 0.13 -0.2 721,226 + SMc03023 0.13 +1.1 721,227 - SMc03023 0.13 -0.0 721,227 - SMc03023 0.13 +0.1 721,227 - SMc03023 0.13 +0.3 721,230 - SMc03023 0.13 +1.5 721,230 - SMc03023 0.13 -0.2 721,290 - SMc03023 0.21 +0.5 721,295 + SMc03023 0.22 +0.2 721,296 - SMc03023 0.22 +0.2 721,296 - SMc03023 0.22 -1.0 721,332 - SMc03023 0.26 -0.1 721,332 - SMc03023 0.26 +1.1 721,415 + SMc03023 0.37 +1.0 721,508 - SMc03023 0.49 -0.1 721,568 + SMc03023 0.57 +0.3 721,569 - SMc03023 0.57 -0.2 721,604 + SMc03023 0.61 +0.2 721,706 + SMc03023 0.74 +0.8 721,707 - SMc03023 0.74 +0.3 721,923 + -0.3 721,923 + -0.4 721,924 - -0.2 721,982 + SMc03024 0.10 +0.1 722,070 + SMc03024 0.22 +0.3 722,071 - SMc03024 0.22 +0.4 722,071 - SMc03024 0.22 -0.0 722,071 - SMc03024 0.22 -0.3 722,243 - SMc03024 0.46 -0.4 722,377 - SMc03024 0.65 +1.2 722,377 - SMc03024 0.65 +0.5 722,377 - SMc03024 0.65 +1.8 722,410 - SMc03024 0.69 +0.4 722,515 + SMc03024 0.84 +0.5 722,516 - SMc03024 0.84 +0.3 722,516 - SMc03024 0.84 +1.3 722,573 + -0.2 722,573 + -0.3 722,574 - +0.8 722,574 - +1.4 722,751 + -1.9 722,814 + +1.4 722,814 + -1.2 722,815 - -0.2 722,815 - -0.4 722,815 - -0.5 722,815 - +0.1 723,169 + SMc03025 0.35 +0.5
Or see this region's nucleotide sequence