Experiment: 6-Pentyl-2H-pyran-2-one 0.385649 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02700 and SMc02701 overlap by 4 nucleotides SMc02701 and SMc02702 overlap by 4 nucleotides SMc02702 and SMc02703 are separated by 298 nucleotides
SMc02700: SMc02700 - hypothetical protein, at 2,548,041 to 2,549,300
SMc02700
SMc02701: SMc02701 - hypothetical protein, at 2,549,297 to 2,549,929
SMc02701
SMc02702: SMc02702 - hypothetical protein, at 2,549,926 to 2,550,609
SMc02702
SMc02703: SMc02703 - hypothetical protein, at 2,550,908 to 2,551,921
SMc02703
Position (kb)
2549
2550 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2549.305 kb on - strand at 2549.305 kb on - strand at 2549.367 kb on + strand, within SMc02701 at 2549.380 kb on - strand, within SMc02701 at 2549.559 kb on + strand, within SMc02701 at 2549.560 kb on - strand, within SMc02701 at 2549.560 kb on - strand, within SMc02701 at 2549.560 kb on - strand, within SMc02701 at 2549.805 kb on + strand, within SMc02701 at 2549.805 kb on + strand, within SMc02701 at 2549.806 kb on - strand, within SMc02701 at 2549.810 kb on + strand, within SMc02701 at 2549.810 kb on + strand, within SMc02701 at 2549.810 kb on + strand, within SMc02701 at 2549.811 kb on - strand, within SMc02701 at 2550.047 kb on + strand, within SMc02702 at 2550.047 kb on + strand, within SMc02702 at 2550.047 kb on + strand, within SMc02702 at 2550.047 kb on + strand, within SMc02702 at 2550.047 kb on + strand, within SMc02702 at 2550.048 kb on - strand, within SMc02702 at 2550.048 kb on - strand, within SMc02702 at 2550.048 kb on - strand, within SMc02702 at 2550.048 kb on - strand, within SMc02702 at 2550.098 kb on + strand, within SMc02702 at 2550.293 kb on + strand, within SMc02702 at 2550.294 kb on - strand, within SMc02702 at 2550.294 kb on - strand, within SMc02702 at 2550.294 kb on - strand, within SMc02702 at 2550.294 kb on - strand, within SMc02702 at 2550.294 kb on - strand, within SMc02702 at 2550.294 kb on - strand, within SMc02702 at 2550.374 kb on + strand, within SMc02702 at 2550.375 kb on - strand, within SMc02702 at 2550.375 kb on - strand, within SMc02702 at 2550.375 kb on - strand, within SMc02702 at 2550.653 kb on + strand at 2550.654 kb on - strand at 2550.662 kb on + strand at 2550.662 kb on + strand at 2550.685 kb on + strand at 2550.701 kb on - strand at 2550.737 kb on + strand at 2550.796 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.385649 mM remove 2,549,305 - -0.6 2,549,305 - +0.0 2,549,367 + SMc02701 0.11 -0.3 2,549,380 - SMc02701 0.13 -0.4 2,549,559 + SMc02701 0.41 +0.2 2,549,560 - SMc02701 0.42 -0.4 2,549,560 - SMc02701 0.42 -0.7 2,549,560 - SMc02701 0.42 +0.1 2,549,805 + SMc02701 0.80 -0.0 2,549,805 + SMc02701 0.80 -1.4 2,549,806 - SMc02701 0.80 +0.1 2,549,810 + SMc02701 0.81 -0.6 2,549,810 + SMc02701 0.81 -1.9 2,549,810 + SMc02701 0.81 -0.6 2,549,811 - SMc02701 0.81 -0.9 2,550,047 + SMc02702 0.18 -0.5 2,550,047 + SMc02702 0.18 +2.8 2,550,047 + SMc02702 0.18 +0.3 2,550,047 + SMc02702 0.18 -0.4 2,550,047 + SMc02702 0.18 -0.2 2,550,048 - SMc02702 0.18 +0.0 2,550,048 - SMc02702 0.18 -0.6 2,550,048 - SMc02702 0.18 -0.3 2,550,048 - SMc02702 0.18 +0.8 2,550,098 + SMc02702 0.25 -0.8 2,550,293 + SMc02702 0.54 -0.0 2,550,294 - SMc02702 0.54 +0.4 2,550,294 - SMc02702 0.54 -0.4 2,550,294 - SMc02702 0.54 -0.0 2,550,294 - SMc02702 0.54 +0.3 2,550,294 - SMc02702 0.54 +0.1 2,550,294 - SMc02702 0.54 +0.8 2,550,374 + SMc02702 0.65 -0.3 2,550,375 - SMc02702 0.66 -0.4 2,550,375 - SMc02702 0.66 -0.5 2,550,375 - SMc02702 0.66 +0.1 2,550,653 + +0.7 2,550,654 - +1.1 2,550,662 + +0.4 2,550,662 + +0.5 2,550,685 + -0.1 2,550,701 - -0.1 2,550,737 + +0.4 2,550,796 + -0.1
Or see this region's nucleotide sequence