Experiment: 6-Pentyl-2H-pyran-2-one 0.385649 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1875 and SMa1878 are separated by 664 nucleotides SMa1878 and SMa1881 are separated by 526 nucleotides
SMa1875: SMa1875 - reverse transcriptase, at 1,065,694 to 1,067,211
SMa1875
SMa1878: SMa1878 - transposase, at 1,067,876 to 1,068,031
SMa1878
SMa1881: SMa1881 - hypothetical protein, at 1,068,558 to 1,069,151
SMa1881
Position (kb)
1067
1068
1069 Strain fitness (log2 ratio)
-1
0
1
2 at 1066.940 kb on + strand, within SMa1875 at 1066.941 kb on - strand, within SMa1875 at 1067.143 kb on - strand at 1067.177 kb on - strand at 1067.230 kb on + strand at 1067.230 kb on + strand at 1067.230 kb on + strand at 1067.238 kb on + strand at 1067.293 kb on + strand at 1067.322 kb on + strand at 1067.405 kb on - strand at 1067.447 kb on - strand at 1067.558 kb on + strand at 1067.559 kb on - strand at 1067.559 kb on - strand at 1067.560 kb on + strand at 1067.560 kb on + strand at 1067.654 kb on + strand at 1067.655 kb on - strand at 1067.833 kb on + strand at 1067.833 kb on + strand at 1067.833 kb on + strand at 1067.833 kb on + strand at 1067.833 kb on + strand at 1067.834 kb on - strand at 1067.834 kb on - strand at 1067.834 kb on - strand at 1067.834 kb on - strand at 1067.838 kb on - strand at 1067.991 kb on + strand, within SMa1878 at 1067.991 kb on + strand, within SMa1878 at 1067.992 kb on - strand, within SMa1878 at 1068.482 kb on + strand at 1068.483 kb on - strand at 1068.672 kb on - strand, within SMa1881 at 1068.672 kb on - strand, within SMa1881 at 1068.672 kb on - strand, within SMa1881 at 1068.741 kb on - strand, within SMa1881 at 1068.755 kb on + strand, within SMa1881 at 1068.789 kb on - strand, within SMa1881 at 1068.868 kb on + strand, within SMa1881 at 1068.879 kb on + strand, within SMa1881 at 1068.879 kb on + strand, within SMa1881 at 1068.879 kb on + strand, within SMa1881 at 1068.880 kb on - strand, within SMa1881 at 1068.880 kb on - strand, within SMa1881 at 1068.936 kb on + strand, within SMa1881 at 1068.936 kb on + strand, within SMa1881
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.385649 mM remove 1,066,940 + SMa1875 0.82 +0.4 1,066,941 - SMa1875 0.82 +0.4 1,067,143 - -0.3 1,067,177 - -0.0 1,067,230 + -0.2 1,067,230 + -0.2 1,067,230 + +0.8 1,067,238 + +0.3 1,067,293 + +0.0 1,067,322 + +2.3 1,067,405 - +0.2 1,067,447 - -0.4 1,067,558 + +0.5 1,067,559 - -0.2 1,067,559 - +0.1 1,067,560 + +0.6 1,067,560 + -0.7 1,067,654 + +0.3 1,067,655 - +1.4 1,067,833 + -0.3 1,067,833 + -0.4 1,067,833 + +0.2 1,067,833 + -0.3 1,067,833 + +0.4 1,067,834 - +0.3 1,067,834 - -0.3 1,067,834 - +0.3 1,067,834 - +0.1 1,067,838 - +0.5 1,067,991 + SMa1878 0.74 +0.5 1,067,991 + SMa1878 0.74 +0.4 1,067,992 - SMa1878 0.74 +0.4 1,068,482 + -0.1 1,068,483 - -0.3 1,068,672 - SMa1881 0.19 -0.3 1,068,672 - SMa1881 0.19 -0.6 1,068,672 - SMa1881 0.19 -0.9 1,068,741 - SMa1881 0.31 -0.7 1,068,755 + SMa1881 0.33 +0.2 1,068,789 - SMa1881 0.39 +0.0 1,068,868 + SMa1881 0.52 +0.9 1,068,879 + SMa1881 0.54 +0.2 1,068,879 + SMa1881 0.54 -0.3 1,068,879 + SMa1881 0.54 -0.5 1,068,880 - SMa1881 0.54 +0.3 1,068,880 - SMa1881 0.54 -0.1 1,068,936 + SMa1881 0.64 +0.0 1,068,936 + SMa1881 0.64 -1.0
Or see this region's nucleotide sequence