Experiment: 6-Pentyl-2H-pyran-2-one 0.385649 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1279 and SMa1283 are separated by 685 nucleotides SMa1283 and SMa1285 are separated by 365 nucleotides SMa1285 and SMa1288 overlap by 4 nucleotides
SMa1279: SMa1279 - NorE accessory protein for nitric oxide reductase, at 698,968 to 699,534
SMa1279
SMa1283: SMa1283 - NnrU family protein, at 700,220 to 700,906
SMa1283
SMa1285: SMa1285 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, at 701,272 to 701,874
SMa1285
SMa1288: SMa1288 - Carboxylase, at 701,871 to 703,322
SMa1288
Position (kb) 700
701 Strain fitness (log2 ratio) -1
0
1
2 at 699.417 kb on + strand, within SMa1279 at 699.553 kb on - strand at 699.612 kb on - strand at 699.704 kb on + strand at 699.849 kb on + strand at 699.849 kb on + strand at 699.998 kb on + strand at 699.998 kb on + strand at 699.998 kb on + strand at 699.998 kb on + strand at 699.998 kb on + strand at 700.003 kb on + strand at 700.003 kb on + strand at 700.003 kb on + strand at 700.003 kb on + strand at 700.004 kb on - strand at 700.004 kb on - strand at 700.004 kb on - strand at 700.007 kb on + strand at 700.007 kb on + strand at 700.008 kb on - strand at 700.184 kb on - strand at 700.197 kb on - strand at 700.197 kb on - strand at 700.337 kb on + strand, within SMa1283 at 700.376 kb on + strand, within SMa1283 at 700.671 kb on + strand, within SMa1283 at 700.671 kb on + strand, within SMa1283 at 700.672 kb on - strand, within SMa1283 at 700.672 kb on - strand, within SMa1283 at 700.672 kb on - strand, within SMa1283 at 700.675 kb on + strand, within SMa1283 at 700.675 kb on + strand, within SMa1283 at 700.676 kb on - strand, within SMa1283 at 700.676 kb on - strand, within SMa1283 at 700.904 kb on + strand at 700.904 kb on + strand at 700.904 kb on + strand at 700.905 kb on - strand at 700.905 kb on - strand at 701.104 kb on + strand at 701.273 kb on + strand at 701.273 kb on + strand at 701.274 kb on - strand at 701.274 kb on - strand at 701.408 kb on + strand, within SMa1285 at 701.408 kb on + strand, within SMa1285 at 701.408 kb on + strand, within SMa1285 at 701.408 kb on + strand, within SMa1285 at 701.408 kb on + strand, within SMa1285 at 701.678 kb on + strand, within SMa1285
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.385649 mM remove 699,417 + SMa1279 0.79 -0.1 699,553 - -0.1 699,612 - +1.5 699,704 + +0.5 699,849 + +0.2 699,849 + +1.1 699,998 + -0.1 699,998 + +0.9 699,998 + +0.9 699,998 + +0.5 699,998 + -0.5 700,003 + -0.2 700,003 + -0.3 700,003 + -0.2 700,003 + -0.3 700,004 - -0.8 700,004 - +0.4 700,004 - -0.2 700,007 + -0.0 700,007 + +0.2 700,008 - -0.8 700,184 - -0.5 700,197 - -0.8 700,197 - +0.2 700,337 + SMa1283 0.17 -0.2 700,376 + SMa1283 0.23 -0.5 700,671 + SMa1283 0.66 -1.4 700,671 + SMa1283 0.66 +2.2 700,672 - SMa1283 0.66 -0.5 700,672 - SMa1283 0.66 -0.2 700,672 - SMa1283 0.66 -1.6 700,675 + SMa1283 0.66 +0.8 700,675 + SMa1283 0.66 -0.2 700,676 - SMa1283 0.66 -0.2 700,676 - SMa1283 0.66 -0.7 700,904 + +0.5 700,904 + -0.9 700,904 + -0.1 700,905 - +0.1 700,905 - +0.4 701,104 + -0.2 701,273 + -0.3 701,273 + +0.2 701,274 - +0.2 701,274 - +0.4 701,408 + SMa1285 0.23 -0.1 701,408 + SMa1285 0.23 +0.2 701,408 + SMa1285 0.23 +0.4 701,408 + SMa1285 0.23 -0.1 701,408 + SMa1285 0.23 -0.5 701,678 + SMa1285 0.67 -0.8
Or see this region's nucleotide sequence