Experiment: 6-Pentyl-2H-pyran-2-one 0.385649 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21278 and SM_b21279 are separated by 6 nucleotides SM_b21279 and SM_b21280 are separated by 151 nucleotides
SM_b21278: SM_b21278 - adenine deaminase, at 851,706 to 853,487
_b21278
SM_b21279: SM_b21279 - amidohydrolase, at 853,494 to 854,663
_b21279
SM_b21280: SM_b21280 - phosphoribosyltransferase, at 854,815 to 855,525
_b21280
Position (kb) 853
854
855 Strain fitness (log2 ratio) -1
0
1
2 at 852.521 kb on + strand, within SM_b21278 at 852.557 kb on + strand, within SM_b21278 at 852.983 kb on + strand, within SM_b21278 at 852.984 kb on - strand, within SM_b21278 at 853.014 kb on - strand, within SM_b21278 at 853.014 kb on - strand, within SM_b21278 at 853.247 kb on - strand, within SM_b21278 at 853.360 kb on - strand at 853.441 kb on + strand at 853.442 kb on - strand at 853.570 kb on + strand at 853.581 kb on - strand at 853.627 kb on + strand, within SM_b21279 at 853.627 kb on + strand, within SM_b21279 at 853.628 kb on - strand, within SM_b21279 at 853.628 kb on - strand, within SM_b21279 at 853.628 kb on - strand, within SM_b21279 at 853.775 kb on + strand, within SM_b21279 at 853.775 kb on + strand, within SM_b21279 at 853.775 kb on + strand, within SM_b21279 at 853.776 kb on - strand, within SM_b21279 at 853.792 kb on + strand, within SM_b21279 at 853.810 kb on + strand, within SM_b21279 at 853.810 kb on + strand, within SM_b21279 at 853.811 kb on - strand, within SM_b21279 at 853.811 kb on - strand, within SM_b21279 at 853.811 kb on - strand, within SM_b21279 at 853.811 kb on - strand, within SM_b21279 at 853.878 kb on - strand, within SM_b21279 at 853.880 kb on - strand, within SM_b21279 at 854.189 kb on - strand, within SM_b21279 at 854.345 kb on + strand, within SM_b21279 at 854.814 kb on + strand at 854.815 kb on - strand at 854.848 kb on + strand at 855.146 kb on - strand, within SM_b21280 at 855.210 kb on + strand, within SM_b21280 at 855.211 kb on - strand, within SM_b21280 at 855.211 kb on - strand, within SM_b21280 at 855.242 kb on - strand, within SM_b21280 at 855.452 kb on + strand, within SM_b21280 at 855.453 kb on - strand, within SM_b21280 at 855.453 kb on - strand, within SM_b21280 at 855.523 kb on + strand at 855.523 kb on + strand at 855.524 kb on - strand at 855.524 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.385649 mM remove 852,521 + SM_b21278 0.46 -0.1 852,557 + SM_b21278 0.48 -0.3 852,983 + SM_b21278 0.72 +0.3 852,984 - SM_b21278 0.72 +0.0 853,014 - SM_b21278 0.73 -0.1 853,014 - SM_b21278 0.73 -0.1 853,247 - SM_b21278 0.86 -0.0 853,360 - -0.1 853,441 + -0.0 853,442 - +0.1 853,570 + +0.1 853,581 - +2.4 853,627 + SM_b21279 0.11 -0.3 853,627 + SM_b21279 0.11 +1.5 853,628 - SM_b21279 0.11 +0.3 853,628 - SM_b21279 0.11 +0.1 853,628 - SM_b21279 0.11 +0.8 853,775 + SM_b21279 0.24 +0.6 853,775 + SM_b21279 0.24 +0.6 853,775 + SM_b21279 0.24 +0.8 853,776 - SM_b21279 0.24 +0.1 853,792 + SM_b21279 0.25 +1.4 853,810 + SM_b21279 0.27 +0.0 853,810 + SM_b21279 0.27 +1.2 853,811 - SM_b21279 0.27 -0.7 853,811 - SM_b21279 0.27 -0.1 853,811 - SM_b21279 0.27 +1.2 853,811 - SM_b21279 0.27 +0.3 853,878 - SM_b21279 0.33 +0.7 853,880 - SM_b21279 0.33 -0.1 854,189 - SM_b21279 0.59 +0.2 854,345 + SM_b21279 0.73 -0.3 854,814 + -0.5 854,815 - +0.5 854,848 + +0.0 855,146 - SM_b21280 0.47 +0.4 855,210 + SM_b21280 0.56 -0.8 855,211 - SM_b21280 0.56 -0.4 855,211 - SM_b21280 0.56 +0.2 855,242 - SM_b21280 0.60 +0.4 855,452 + SM_b21280 0.90 -1.0 855,453 - SM_b21280 0.90 -0.1 855,453 - SM_b21280 0.90 +2.2 855,523 + +0.3 855,523 + -0.2 855,524 - -0.6 855,524 - -0.2
Or see this region's nucleotide sequence