Experiment: 6-Pentyl-2H-pyran-2-one 0.385649 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20467 and SM_b20468 overlap by 4 nucleotides SM_b20468 and SM_b20469 are separated by 29 nucleotides SM_b20469 and SM_b20470 are separated by 668 nucleotides
SM_b20467: SM_b20467 - sensor kinase, at 479,716 to 481,539
_b20467
SM_b20468: SM_b20468 - sensory transduction DNA-binding response regulator protein, at 481,536 to 482,180
_b20468
SM_b20469: SM_b20469 - hypothetical protein, at 482,210 to 483,286
_b20469
SM_b20470: SM_b20470 - hypothetical protein, at 483,955 to 484,386
_b20470
Position (kb) 482
483
484 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 481.211 kb on + strand, within SM_b20467 at 481.211 kb on + strand, within SM_b20467 at 481.212 kb on - strand, within SM_b20467 at 481.212 kb on - strand, within SM_b20467 at 481.212 kb on - strand, within SM_b20467 at 481.214 kb on - strand, within SM_b20467 at 481.214 kb on - strand, within SM_b20467 at 481.263 kb on + strand, within SM_b20467 at 481.263 kb on + strand, within SM_b20467 at 481.263 kb on + strand, within SM_b20467 at 481.263 kb on + strand, within SM_b20467 at 481.263 kb on + strand, within SM_b20467 at 481.264 kb on - strand, within SM_b20467 at 481.264 kb on - strand, within SM_b20467 at 481.269 kb on - strand, within SM_b20467 at 481.346 kb on + strand, within SM_b20467 at 481.346 kb on + strand, within SM_b20467 at 481.346 kb on + strand, within SM_b20467 at 481.484 kb on + strand at 481.573 kb on + strand at 481.702 kb on + strand, within SM_b20468 at 481.702 kb on + strand, within SM_b20468 at 481.703 kb on - strand, within SM_b20468 at 481.703 kb on - strand, within SM_b20468 at 481.703 kb on - strand, within SM_b20468 at 481.703 kb on - strand, within SM_b20468 at 481.733 kb on + strand, within SM_b20468 at 481.819 kb on + strand, within SM_b20468 at 481.908 kb on + strand, within SM_b20468 at 481.909 kb on - strand, within SM_b20468 at 481.928 kb on - strand, within SM_b20468 at 482.107 kb on - strand, within SM_b20468 at 482.107 kb on - strand, within SM_b20468 at 482.148 kb on - strand at 482.319 kb on + strand, within SM_b20469 at 482.319 kb on + strand, within SM_b20469 at 482.319 kb on + strand, within SM_b20469 at 482.320 kb on - strand, within SM_b20469 at 482.320 kb on - strand, within SM_b20469 at 482.320 kb on - strand, within SM_b20469 at 482.329 kb on + strand, within SM_b20469 at 482.330 kb on - strand, within SM_b20469 at 482.330 kb on - strand, within SM_b20469 at 482.330 kb on - strand, within SM_b20469 at 482.475 kb on + strand, within SM_b20469 at 482.475 kb on + strand, within SM_b20469 at 482.475 kb on + strand, within SM_b20469 at 482.476 kb on - strand, within SM_b20469 at 482.476 kb on - strand, within SM_b20469 at 482.485 kb on + strand, within SM_b20469 at 482.485 kb on + strand, within SM_b20469 at 482.485 kb on + strand, within SM_b20469 at 482.671 kb on + strand, within SM_b20469 at 482.671 kb on + strand, within SM_b20469 at 482.733 kb on + strand, within SM_b20469 at 482.733 kb on + strand, within SM_b20469 at 482.733 kb on + strand, within SM_b20469 at 482.733 kb on + strand, within SM_b20469 at 482.734 kb on - strand, within SM_b20469 at 482.776 kb on + strand, within SM_b20469 at 482.776 kb on + strand, within SM_b20469 at 482.777 kb on - strand, within SM_b20469 at 483.025 kb on - strand, within SM_b20469 at 483.026 kb on + strand, within SM_b20469 at 483.026 kb on + strand, within SM_b20469 at 483.026 kb on + strand, within SM_b20469 at 483.027 kb on - strand, within SM_b20469 at 483.027 kb on - strand, within SM_b20469 at 483.027 kb on - strand, within SM_b20469 at 483.027 kb on - strand, within SM_b20469 at 483.040 kb on + strand, within SM_b20469 at 483.064 kb on + strand, within SM_b20469 at 483.064 kb on + strand, within SM_b20469 at 483.065 kb on - strand, within SM_b20469 at 483.066 kb on + strand at 483.331 kb on + strand at 483.332 kb on - strand at 483.372 kb on - strand at 483.387 kb on - strand at 483.393 kb on - strand at 483.393 kb on - strand at 483.414 kb on + strand at 483.453 kb on + strand at 483.454 kb on - strand at 483.468 kb on + strand at 483.479 kb on + strand at 483.479 kb on + strand at 483.480 kb on - strand at 483.509 kb on + strand at 483.546 kb on + strand at 483.546 kb on + strand at 483.626 kb on + strand at 483.709 kb on + strand at 483.823 kb on - strand at 483.823 kb on - strand at 483.852 kb on + strand at 484.023 kb on + strand, within SM_b20470 at 484.024 kb on - strand, within SM_b20470 at 484.047 kb on + strand, within SM_b20470 at 484.083 kb on - strand, within SM_b20470 at 484.193 kb on + strand, within SM_b20470 at 484.193 kb on + strand, within SM_b20470 at 484.194 kb on - strand, within SM_b20470 at 484.194 kb on - strand, within SM_b20470 at 484.194 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.237 kb on + strand, within SM_b20470 at 484.238 kb on - strand, within SM_b20470 at 484.238 kb on - strand, within SM_b20470 at 484.257 kb on + strand, within SM_b20470
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.385649 mM remove 481,211 + SM_b20467 0.82 -1.1 481,211 + SM_b20467 0.82 +0.1 481,212 - SM_b20467 0.82 -0.8 481,212 - SM_b20467 0.82 -0.1 481,212 - SM_b20467 0.82 -2.6 481,214 - SM_b20467 0.82 -0.1 481,214 - SM_b20467 0.82 -0.2 481,263 + SM_b20467 0.85 -0.6 481,263 + SM_b20467 0.85 -0.4 481,263 + SM_b20467 0.85 -0.2 481,263 + SM_b20467 0.85 +1.5 481,263 + SM_b20467 0.85 +0.1 481,264 - SM_b20467 0.85 +0.8 481,264 - SM_b20467 0.85 -0.8 481,269 - SM_b20467 0.85 -0.2 481,346 + SM_b20467 0.89 +0.1 481,346 + SM_b20467 0.89 -0.8 481,346 + SM_b20467 0.89 -0.0 481,484 + +0.2 481,573 + -0.2 481,702 + SM_b20468 0.26 +0.0 481,702 + SM_b20468 0.26 -0.0 481,703 - SM_b20468 0.26 +0.6 481,703 - SM_b20468 0.26 -0.6 481,703 - SM_b20468 0.26 +0.2 481,703 - SM_b20468 0.26 -0.8 481,733 + SM_b20468 0.31 -0.3 481,819 + SM_b20468 0.44 -0.1 481,908 + SM_b20468 0.58 -0.4 481,909 - SM_b20468 0.58 -1.8 481,928 - SM_b20468 0.61 -0.2 482,107 - SM_b20468 0.89 -0.3 482,107 - SM_b20468 0.89 -0.3 482,148 - -0.8 482,319 + SM_b20469 0.10 +0.2 482,319 + SM_b20469 0.10 -0.6 482,319 + SM_b20469 0.10 +0.1 482,320 - SM_b20469 0.10 +2.1 482,320 - SM_b20469 0.10 +0.8 482,320 - SM_b20469 0.10 -0.1 482,329 + SM_b20469 0.11 -0.7 482,330 - SM_b20469 0.11 -0.4 482,330 - SM_b20469 0.11 +2.5 482,330 - SM_b20469 0.11 +0.4 482,475 + SM_b20469 0.25 -0.8 482,475 + SM_b20469 0.25 -0.5 482,475 + SM_b20469 0.25 -1.1 482,476 - SM_b20469 0.25 -0.8 482,476 - SM_b20469 0.25 -0.8 482,485 + SM_b20469 0.26 -3.5 482,485 + SM_b20469 0.26 -0.1 482,485 + SM_b20469 0.26 -0.2 482,671 + SM_b20469 0.43 +0.2 482,671 + SM_b20469 0.43 -0.3 482,733 + SM_b20469 0.49 -0.5 482,733 + SM_b20469 0.49 -0.6 482,733 + SM_b20469 0.49 -0.2 482,733 + SM_b20469 0.49 -0.6 482,734 - SM_b20469 0.49 -0.8 482,776 + SM_b20469 0.53 +0.2 482,776 + SM_b20469 0.53 -2.2 482,777 - SM_b20469 0.53 +0.0 483,025 - SM_b20469 0.76 +0.2 483,026 + SM_b20469 0.76 +0.3 483,026 + SM_b20469 0.76 -1.5 483,026 + SM_b20469 0.76 +0.8 483,027 - SM_b20469 0.76 -0.3 483,027 - SM_b20469 0.76 -0.5 483,027 - SM_b20469 0.76 -0.2 483,027 - SM_b20469 0.76 -0.8 483,040 + SM_b20469 0.77 -0.1 483,064 + SM_b20469 0.79 +1.2 483,064 + SM_b20469 0.79 -0.8 483,065 - SM_b20469 0.79 -0.7 483,066 + -1.1 483,331 + +1.8 483,332 - +0.7 483,372 - -0.2 483,387 - -1.2 483,393 - +0.8 483,393 - -1.2 483,414 + -0.5 483,453 + -0.2 483,454 - -0.1 483,468 + +0.4 483,479 + +0.2 483,479 + -0.4 483,480 - -1.9 483,509 + -0.2 483,546 + +0.8 483,546 + +0.8 483,626 + +0.2 483,709 + +0.3 483,823 - -0.3 483,823 - -0.1 483,852 + -0.1 484,023 + SM_b20470 0.16 +0.3 484,024 - SM_b20470 0.16 -0.2 484,047 + SM_b20470 0.21 -0.3 484,083 - SM_b20470 0.30 +0.9 484,193 + SM_b20470 0.55 +1.2 484,193 + SM_b20470 0.55 -0.5 484,194 - SM_b20470 0.55 -0.1 484,194 - SM_b20470 0.55 +0.0 484,194 - SM_b20470 0.55 -0.9 484,198 - SM_b20470 0.56 -0.1 484,198 - SM_b20470 0.56 +0.2 484,198 - SM_b20470 0.56 +0.5 484,198 - SM_b20470 0.56 -0.1 484,198 - SM_b20470 0.56 -0.7 484,237 + SM_b20470 0.65 -0.2 484,238 - SM_b20470 0.66 -0.7 484,238 - SM_b20470 0.66 +0.4 484,257 + SM_b20470 0.70 +0.5
Or see this region's nucleotide sequence