Experiment: 6-Pentyl-2H-pyran-2-one 0.4177863333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0478 and SMa5024 are separated by 408 nucleotides SMa5024 and SMa0483 are separated by 831 nucleotides
SMa0478: SMa0478 - formate dehydrogenase, at 260,764 to 261,969
SMa0478
SMa5024: SMa5024 - hypothetical protein, at 262,378 to 262,674
SMa5024
SMa0483: SMa0483 - Phosphatase, at 263,506 to 264,432
SMa0483
Position (kb) 262
263 Strain fitness (log2 ratio) -1
0
1
2
3 at 261.401 kb on + strand, within SMa0478 at 261.402 kb on - strand, within SMa0478 at 261.443 kb on - strand, within SMa0478 at 261.466 kb on - strand, within SMa0478 at 261.467 kb on + strand, within SMa0478 at 261.468 kb on - strand, within SMa0478 at 261.468 kb on - strand, within SMa0478 at 261.468 kb on - strand, within SMa0478 at 261.531 kb on - strand, within SMa0478 at 261.756 kb on + strand, within SMa0478 at 261.938 kb on + strand at 262.110 kb on - strand at 262.187 kb on - strand at 262.356 kb on - strand at 262.393 kb on - strand at 262.457 kb on + strand, within SMa5024 at 262.505 kb on - strand, within SMa5024 at 262.505 kb on - strand, within SMa5024 at 262.510 kb on + strand, within SMa5024 at 262.599 kb on - strand, within SMa5024 at 262.691 kb on + strand at 263.042 kb on + strand at 263.126 kb on + strand at 263.126 kb on + strand at 263.201 kb on + strand at 263.207 kb on - strand at 263.258 kb on + strand at 263.258 kb on + strand at 263.303 kb on + strand at 263.304 kb on - strand at 263.304 kb on - strand at 263.304 kb on - strand at 263.304 kb on - strand at 263.304 kb on - strand at 263.372 kb on + strand at 263.373 kb on - strand at 263.383 kb on + strand at 263.383 kb on + strand at 263.383 kb on + strand at 263.384 kb on - strand at 263.384 kb on - strand at 263.477 kb on - strand at 263.507 kb on + strand at 263.507 kb on + strand at 263.547 kb on + strand at 263.547 kb on + strand at 263.584 kb on - strand at 263.584 kb on - strand at 263.657 kb on + strand, within SMa0483 at 263.657 kb on + strand, within SMa0483 at 263.658 kb on - strand, within SMa0483 at 263.665 kb on + strand, within SMa0483 at 263.666 kb on - strand, within SMa0483
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.4177863333 mM remove 261,401 + SMa0478 0.53 +1.5 261,402 - SMa0478 0.53 -0.4 261,443 - SMa0478 0.56 +1.5 261,466 - SMa0478 0.58 -0.0 261,467 + SMa0478 0.58 -0.1 261,468 - SMa0478 0.58 -1.1 261,468 - SMa0478 0.58 +0.1 261,468 - SMa0478 0.58 -0.6 261,531 - SMa0478 0.64 +0.1 261,756 + SMa0478 0.82 -0.5 261,938 + +0.2 262,110 - -0.1 262,187 - +0.4 262,356 - +1.5 262,393 - -0.9 262,457 + SMa5024 0.27 -1.4 262,505 - SMa5024 0.43 +0.9 262,505 - SMa5024 0.43 -0.1 262,510 + SMa5024 0.44 -0.2 262,599 - SMa5024 0.74 -0.5 262,691 + +0.1 263,042 + +0.5 263,126 + -1.0 263,126 + -0.2 263,201 + -0.3 263,207 - -1.0 263,258 + -0.7 263,258 + +3.2 263,303 + -0.9 263,304 - +0.7 263,304 - +1.0 263,304 - -0.9 263,304 - +0.3 263,304 - -0.7 263,372 + -0.5 263,373 - -0.9 263,383 + -1.4 263,383 + +1.1 263,383 + +1.9 263,384 - +0.0 263,384 - -0.0 263,477 - -0.9 263,507 + -1.5 263,507 + +2.9 263,547 + +1.9 263,547 + -0.6 263,584 - -0.1 263,584 - -0.9 263,657 + SMa0483 0.16 +0.4 263,657 + SMa0483 0.16 +0.3 263,658 - SMa0483 0.16 -0.2 263,665 + SMa0483 0.17 -0.3 263,666 - SMa0483 0.17 -0.2
Or see this region's nucleotide sequence