Experiment: 6-Pentyl-2H-pyran-2-one 0.4177863333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1674 and SMa1675 overlap by 2 nucleotides SMa1675 and SMa1676 are separated by 60 nucleotides SMa1676 and SMa1677 are separated by 84 nucleotides
SMa1674: SMa1674 - hypothetical protein, at 938,993 to 939,304
SMa1674
SMa1675: SMa1675 - hypothetical protein, at 939,303 to 939,953
SMa1675
SMa1676: SMa1676 - hypothetical protein, at 940,014 to 941,072
SMa1676
SMa1677: SMa1677 - Metallo-dependent hydrolase, at 941,157 to 942,590
SMa1677
Position (kb) 940
941
942 Strain fitness (log2 ratio) -2
-1
0
1
2 at 939.016 kb on + strand at 939.017 kb on - strand at 939.081 kb on + strand, within SMa1674 at 939.082 kb on - strand, within SMa1674 at 939.103 kb on - strand, within SMa1674 at 939.267 kb on - strand, within SMa1674 at 939.267 kb on - strand, within SMa1674 at 939.267 kb on - strand, within SMa1674 at 939.267 kb on - strand, within SMa1674 at 939.269 kb on + strand, within SMa1674 at 939.497 kb on - strand, within SMa1675 at 939.498 kb on + strand, within SMa1675 at 939.498 kb on + strand, within SMa1675 at 939.499 kb on - strand, within SMa1675 at 939.499 kb on - strand, within SMa1675 at 939.556 kb on + strand, within SMa1675 at 939.557 kb on - strand, within SMa1675 at 939.557 kb on - strand, within SMa1675 at 939.557 kb on - strand, within SMa1675 at 939.558 kb on + strand, within SMa1675 at 939.558 kb on + strand, within SMa1675 at 939.559 kb on - strand, within SMa1675 at 939.559 kb on - strand, within SMa1675 at 939.560 kb on + strand, within SMa1675 at 939.561 kb on - strand, within SMa1675 at 939.644 kb on + strand, within SMa1675 at 939.984 kb on + strand at 939.985 kb on - strand at 939.985 kb on - strand at 940.166 kb on - strand, within SMa1676 at 940.244 kb on - strand, within SMa1676 at 940.375 kb on + strand, within SMa1676 at 940.375 kb on + strand, within SMa1676 at 940.375 kb on + strand, within SMa1676 at 940.375 kb on + strand at 940.375 kb on + strand, within SMa1676 at 940.376 kb on - strand, within SMa1676 at 940.376 kb on - strand, within SMa1676 at 940.493 kb on - strand, within SMa1676 at 940.615 kb on + strand, within SMa1676 at 940.615 kb on + strand, within SMa1676 at 940.615 kb on + strand, within SMa1676 at 940.616 kb on - strand, within SMa1676 at 940.652 kb on + strand, within SMa1676 at 940.653 kb on - strand, within SMa1676 at 940.680 kb on - strand, within SMa1676 at 940.769 kb on - strand, within SMa1676 at 940.769 kb on - strand, within SMa1676 at 940.833 kb on + strand, within SMa1676 at 940.833 kb on + strand, within SMa1676 at 940.834 kb on - strand, within SMa1676 at 940.898 kb on - strand, within SMa1676 at 940.910 kb on + strand, within SMa1676 at 940.952 kb on + strand, within SMa1676 at 940.953 kb on - strand, within SMa1676 at 941.044 kb on + strand at 941.045 kb on - strand at 941.078 kb on + strand at 941.079 kb on - strand at 941.079 kb on - strand at 941.109 kb on + strand at 941.395 kb on + strand, within SMa1677 at 941.418 kb on + strand, within SMa1677 at 941.419 kb on - strand, within SMa1677 at 941.489 kb on - strand, within SMa1677 at 941.499 kb on + strand, within SMa1677 at 941.500 kb on - strand, within SMa1677 at 941.506 kb on + strand, within SMa1677 at 941.507 kb on - strand, within SMa1677 at 941.530 kb on - strand, within SMa1677 at 941.737 kb on + strand, within SMa1677 at 941.737 kb on + strand, within SMa1677 at 941.737 kb on + strand, within SMa1677 at 941.737 kb on + strand, within SMa1677 at 941.737 kb on + strand, within SMa1677 at 941.738 kb on - strand, within SMa1677 at 941.738 kb on - strand, within SMa1677 at 941.738 kb on - strand, within SMa1677 at 941.845 kb on - strand, within SMa1677 at 942.037 kb on + strand, within SMa1677 at 942.037 kb on + strand, within SMa1677 at 942.037 kb on + strand, within SMa1677 at 942.037 kb on + strand, within SMa1677 at 942.037 kb on + strand, within SMa1677 at 942.038 kb on - strand, within SMa1677
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.4177863333 mM remove 939,016 + -0.9 939,017 - -0.1 939,081 + SMa1674 0.28 +0.1 939,082 - SMa1674 0.29 -0.9 939,103 - SMa1674 0.35 -0.9 939,267 - SMa1674 0.88 -2.2 939,267 - SMa1674 0.88 -0.4 939,267 - SMa1674 0.88 -0.4 939,267 - SMa1674 0.88 +0.3 939,269 + SMa1674 0.88 +0.6 939,497 - SMa1675 0.30 -1.6 939,498 + SMa1675 0.30 +0.1 939,498 + SMa1675 0.30 -0.2 939,499 - SMa1675 0.30 -1.4 939,499 - SMa1675 0.30 -0.5 939,556 + SMa1675 0.39 +0.3 939,557 - SMa1675 0.39 +2.1 939,557 - SMa1675 0.39 -0.6 939,557 - SMa1675 0.39 +0.9 939,558 + SMa1675 0.39 -0.7 939,558 + SMa1675 0.39 -0.4 939,559 - SMa1675 0.39 +0.7 939,559 - SMa1675 0.39 +0.3 939,560 + SMa1675 0.39 +0.2 939,561 - SMa1675 0.40 -0.0 939,644 + SMa1675 0.52 +0.7 939,984 + -1.1 939,985 - -0.7 939,985 - +0.3 940,166 - SMa1676 0.14 -0.1 940,244 - SMa1676 0.22 -0.1 940,375 + SMa1676 0.34 -0.1 940,375 + SMa1676 0.34 -0.1 940,375 + SMa1676 0.34 -0.3 940,375 + +1.9 940,375 + SMa1676 0.34 +0.5 940,376 - SMa1676 0.34 -0.9 940,376 - SMa1676 0.34 +0.3 940,493 - SMa1676 0.45 +0.9 940,615 + SMa1676 0.57 -0.7 940,615 + SMa1676 0.57 -0.5 940,615 + SMa1676 0.57 -1.1 940,616 - SMa1676 0.57 +0.0 940,652 + SMa1676 0.60 -2.2 940,653 - SMa1676 0.60 -0.1 940,680 - SMa1676 0.63 +0.1 940,769 - SMa1676 0.71 -0.2 940,769 - SMa1676 0.71 -0.2 940,833 + SMa1676 0.77 -0.3 940,833 + SMa1676 0.77 +0.1 940,834 - SMa1676 0.77 +0.6 940,898 - SMa1676 0.83 -0.5 940,910 + SMa1676 0.85 +0.3 940,952 + SMa1676 0.89 -0.5 940,953 - SMa1676 0.89 +0.4 941,044 + +0.3 941,045 - -0.3 941,078 + -0.8 941,079 - +0.3 941,079 - +0.9 941,109 + +0.6 941,395 + SMa1677 0.17 -0.1 941,418 + SMa1677 0.18 -2.4 941,419 - SMa1677 0.18 -0.2 941,489 - SMa1677 0.23 +0.2 941,499 + SMa1677 0.24 +0.2 941,500 - SMa1677 0.24 -1.0 941,506 + SMa1677 0.24 -0.0 941,507 - SMa1677 0.24 +0.3 941,530 - SMa1677 0.26 +0.6 941,737 + SMa1677 0.40 -0.6 941,737 + SMa1677 0.40 -1.4 941,737 + SMa1677 0.40 +0.9 941,737 + SMa1677 0.40 -0.3 941,737 + SMa1677 0.40 +0.1 941,738 - SMa1677 0.41 -0.9 941,738 - SMa1677 0.41 -1.0 941,738 - SMa1677 0.41 -0.9 941,845 - SMa1677 0.48 -0.7 942,037 + SMa1677 0.61 -0.6 942,037 + SMa1677 0.61 +0.0 942,037 + SMa1677 0.61 -0.1 942,037 + SMa1677 0.61 -0.1 942,037 + SMa1677 0.61 -0.8 942,038 - SMa1677 0.61 +0.3
Or see this region's nucleotide sequence