Experiment: 6-Pentyl-2H-pyran-2-one 0.4177863333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0825 and SMa0827 are separated by 99 nucleotides SMa0827 and SMa0829 are separated by 90 nucleotides
SMa0825: SMa0825 - nitrogenase reductase, at 453,556 to 454,449
SMa0825
SMa0827: SMa0827 - NifD nitrogenase molybdenum-iron protein alpha chain, at 454,549 to 456,051
SMa0827
SMa0829: SMa0829 - NifK nitrogenase molybdenum-iron protein beta chain, at 456,142 to 457,683
SMa0829
Position (kb) 454
455
456
457 Strain fitness (log2 ratio) -2
-1
0
1 at 453.583 kb on + strand at 453.584 kb on - strand at 453.624 kb on + strand at 453.731 kb on + strand, within SMa0825 at 453.867 kb on + strand, within SMa0825 at 453.904 kb on + strand, within SMa0825 at 453.928 kb on + strand, within SMa0825 at 453.947 kb on + strand, within SMa0825 at 453.948 kb on - strand, within SMa0825 at 453.973 kb on - strand, within SMa0825 at 454.034 kb on - strand, within SMa0825 at 454.059 kb on + strand, within SMa0825 at 454.261 kb on - strand, within SMa0825 at 454.261 kb on - strand, within SMa0825 at 454.342 kb on - strand, within SMa0825 at 454.433 kb on + strand at 454.436 kb on + strand at 454.593 kb on + strand at 454.715 kb on + strand, within SMa0827 at 454.769 kb on - strand, within SMa0827 at 454.873 kb on + strand, within SMa0827 at 454.874 kb on - strand, within SMa0827 at 454.876 kb on + strand, within SMa0827 at 454.876 kb on + strand, within SMa0827 at 454.884 kb on + strand, within SMa0827 at 455.098 kb on + strand, within SMa0827 at 455.099 kb on - strand, within SMa0827 at 455.099 kb on - strand, within SMa0827 at 455.144 kb on + strand, within SMa0827 at 455.219 kb on - strand, within SMa0827 at 455.233 kb on + strand, within SMa0827 at 455.234 kb on - strand, within SMa0827 at 455.258 kb on - strand, within SMa0827 at 455.297 kb on + strand, within SMa0827 at 455.664 kb on + strand, within SMa0827 at 455.696 kb on + strand, within SMa0827 at 455.749 kb on + strand, within SMa0827 at 455.773 kb on + strand, within SMa0827 at 455.773 kb on + strand, within SMa0827 at 455.774 kb on - strand, within SMa0827 at 455.920 kb on + strand at 455.977 kb on - strand at 455.996 kb on - strand at 456.199 kb on + strand at 456.306 kb on - strand, within SMa0829 at 456.437 kb on - strand, within SMa0829 at 456.553 kb on - strand, within SMa0829 at 456.553 kb on - strand, within SMa0829 at 456.557 kb on - strand, within SMa0829 at 456.557 kb on - strand, within SMa0829 at 456.558 kb on + strand, within SMa0829 at 456.745 kb on - strand, within SMa0829 at 456.789 kb on - strand, within SMa0829 at 456.886 kb on + strand, within SMa0829 at 456.922 kb on - strand, within SMa0829 at 456.949 kb on + strand, within SMa0829 at 456.950 kb on - strand, within SMa0829 at 456.950 kb on - strand, within SMa0829 at 457.021 kb on + strand, within SMa0829 at 457.026 kb on + strand, within SMa0829 at 457.046 kb on - strand, within SMa0829
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.4177863333 mM remove 453,583 + +0.3 453,584 - -0.1 453,624 + -0.2 453,731 + SMa0825 0.20 +0.8 453,867 + SMa0825 0.35 -0.1 453,904 + SMa0825 0.39 -0.0 453,928 + SMa0825 0.42 -0.1 453,947 + SMa0825 0.44 -0.0 453,948 - SMa0825 0.44 +0.9 453,973 - SMa0825 0.47 +0.5 454,034 - SMa0825 0.53 -0.8 454,059 + SMa0825 0.56 -0.6 454,261 - SMa0825 0.79 +0.9 454,261 - SMa0825 0.79 +0.7 454,342 - SMa0825 0.88 +0.6 454,433 + +0.2 454,436 + -0.4 454,593 + +1.3 454,715 + SMa0827 0.11 +0.1 454,769 - SMa0827 0.15 -0.9 454,873 + SMa0827 0.22 -0.7 454,874 - SMa0827 0.22 -0.3 454,876 + SMa0827 0.22 +0.2 454,876 + SMa0827 0.22 -0.1 454,884 + SMa0827 0.22 +1.1 455,098 + SMa0827 0.37 +0.1 455,099 - SMa0827 0.37 +0.6 455,099 - SMa0827 0.37 -1.7 455,144 + SMa0827 0.40 +0.8 455,219 - SMa0827 0.45 -0.9 455,233 + SMa0827 0.46 -0.2 455,234 - SMa0827 0.46 +0.3 455,258 - SMa0827 0.47 -0.6 455,297 + SMa0827 0.50 -0.9 455,664 + SMa0827 0.74 -0.1 455,696 + SMa0827 0.76 +1.4 455,749 + SMa0827 0.80 +0.7 455,773 + SMa0827 0.81 -2.0 455,773 + SMa0827 0.81 -0.4 455,774 - SMa0827 0.82 +0.6 455,920 + +0.3 455,977 - +0.9 455,996 - -0.9 456,199 + +0.6 456,306 - SMa0829 0.11 -1.2 456,437 - SMa0829 0.19 -0.7 456,553 - SMa0829 0.27 -0.2 456,553 - SMa0829 0.27 -0.9 456,557 - SMa0829 0.27 -0.9 456,557 - SMa0829 0.27 +0.4 456,558 + SMa0829 0.27 +0.0 456,745 - SMa0829 0.39 -0.1 456,789 - SMa0829 0.42 +0.8 456,886 + SMa0829 0.48 -0.4 456,922 - SMa0829 0.51 -0.1 456,949 + SMa0829 0.52 +0.1 456,950 - SMa0829 0.52 -0.5 456,950 - SMa0829 0.52 -0.5 457,021 + SMa0829 0.57 -1.5 457,026 + SMa0829 0.57 -1.0 457,046 - SMa0829 0.59 +0.3
Or see this region's nucleotide sequence