Experiment: 6-Pentyl-2H-pyran-2-one 0.4177863333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc01515 and SMc01514 are separated by 40 nucleotides SMc01514 and SMc01747 are separated by 229 nucleotides SMc01747 and SMc01513 are separated by 4 nucleotides SMc01513 and SMc01512 are separated by 57 nucleotides
SMc01515: SMc01515 - hypothetical protein, at 2,614,694 to 2,615,620
SMc01515
SMc01514: SMc01514 - hypothetical protein, at 2,615,661 to 2,616,095
SMc01514
SMc01747: SMc01747 - hypothetical protein, at 2,616,325 to 2,616,465
SMc01747
SMc01513: SMc01513 - hemin transport protein, at 2,616,470 to 2,617,537
SMc01513
SMc01512: SMc01512 - hemin binding periplasmic transmembrane protein, at 2,617,595 to 2,618,545
SMc01512
Position (kb)
2616
2617
2618 Strain fitness (log2 ratio)
-1
0
1
2 at 2616.058 kb on - strand at 2616.058 kb on - strand at 2616.088 kb on + strand at 2616.088 kb on + strand at 2616.152 kb on - strand at 2616.304 kb on - strand at 2616.418 kb on + strand, within SMc01747 at 2616.419 kb on - strand at 2616.463 kb on + strand at 2616.463 kb on + strand at 2616.519 kb on - strand at 2616.519 kb on - strand at 2616.725 kb on + strand, within SMc01513 at 2616.932 kb on + strand, within SMc01513 at 2616.938 kb on - strand, within SMc01513 at 2616.938 kb on - strand, within SMc01513 at 2616.938 kb on - strand, within SMc01513 at 2616.938 kb on - strand, within SMc01513 at 2617.793 kb on + strand, within SMc01512 at 2617.793 kb on + strand at 2617.793 kb on + strand, within SMc01512 at 2617.793 kb on + strand, within SMc01512 at 2617.793 kb on + strand, within SMc01512 at 2617.880 kb on + strand, within SMc01512 at 2617.880 kb on + strand, within SMc01512 at 2618.018 kb on + strand, within SMc01512 at 2618.018 kb on + strand, within SMc01512 at 2618.018 kb on + strand, within SMc01512 at 2618.018 kb on + strand, within SMc01512 at 2618.019 kb on - strand, within SMc01512 at 2618.239 kb on + strand, within SMc01512 at 2618.288 kb on + strand, within SMc01512 at 2618.516 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.4177863333 mM remove 2,616,058 - +1.0 2,616,058 - -1.0 2,616,088 + -0.2 2,616,088 + +0.0 2,616,152 - +0.7 2,616,304 - +0.1 2,616,418 + SMc01747 0.66 -1.0 2,616,419 - +0.7 2,616,463 + -0.0 2,616,463 + +0.1 2,616,519 - +2.0 2,616,519 - -0.1 2,616,725 + SMc01513 0.24 -0.3 2,616,932 + SMc01513 0.43 -0.6 2,616,938 - SMc01513 0.44 -1.3 2,616,938 - SMc01513 0.44 -0.3 2,616,938 - SMc01513 0.44 -0.1 2,616,938 - SMc01513 0.44 -0.4 2,617,793 + SMc01512 0.21 +0.0 2,617,793 + -0.1 2,617,793 + SMc01512 0.21 +1.4 2,617,793 + SMc01512 0.21 -0.2 2,617,793 + SMc01512 0.21 +0.1 2,617,880 + SMc01512 0.30 +1.1 2,617,880 + SMc01512 0.30 -1.1 2,618,018 + SMc01512 0.44 +0.5 2,618,018 + SMc01512 0.44 -0.3 2,618,018 + SMc01512 0.44 +0.5 2,618,018 + SMc01512 0.44 +0.5 2,618,019 - SMc01512 0.45 -0.2 2,618,239 + SMc01512 0.68 +0.1 2,618,288 + SMc01512 0.73 +0.1 2,618,516 + +0.0
Or see this region's nucleotide sequence