Experiment: 6-Pentyl-2H-pyran-2-one 0.4177863333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc01372 and SMc01371 are separated by 156 nucleotides SMc01371 and SMc01370 are separated by 17 nucleotides SMc01370 and SMc01369 are separated by 486 nucleotides SMc01369 and SMc01368 are separated by 94 nucleotides
SMc01372: SMc01372 - hypothetical protein, at 1,409,292 to 1,409,561
SMc01372
SMc01371: SMc01371 - 2-component receiver domain-containing protein, at 1,409,718 to 1,410,089
SMc01371
SMc01370: SMc01370 - response regulator PleD, at 1,410,107 to 1,411,474
SMc01370
SMc01369: SMc01369 - 50S ribosomal protein L33, at 1,411,961 to 1,412,128
SMc01369
SMc01368: SMc01368 - transport transmembrane protein, at 1,412,223 to 1,413,407
SMc01368
Position (kb)
1410
1411
1412 Strain fitness (log2 ratio)
-1
0
1 at 1409.117 kb on - strand at 1409.281 kb on - strand at 1409.565 kb on - strand at 1409.597 kb on - strand at 1409.601 kb on - strand at 1409.682 kb on + strand at 1410.106 kb on + strand at 1411.013 kb on + strand, within SMc01370 at 1411.963 kb on - strand at 1412.266 kb on - strand at 1412.272 kb on + strand at 1412.454 kb on - strand, within SMc01368 at 1412.456 kb on - strand, within SMc01368 at 1412.456 kb on - strand, within SMc01368
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.4177863333 mM remove 1,409,117 - -1.7 1,409,281 - -0.2 1,409,565 - -0.7 1,409,597 - -0.1 1,409,601 - +0.5 1,409,682 + +0.9 1,410,106 + -0.2 1,411,013 + SMc01370 0.66 -0.8 1,411,963 - +0.7 1,412,266 - +0.5 1,412,272 + -0.4 1,412,454 - SMc01368 0.19 +1.7 1,412,456 - SMc01368 0.20 +0.5 1,412,456 - SMc01368 0.20 +1.7
Or see this region's nucleotide sequence