Experiment: 6-Pentyl-2H-pyran-2-one 0.4177863333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0873 and SMa0874 are separated by 87 nucleotides SMa0874 and SMa0875 are separated by 6 nucleotides
SMa0873: SMa0873 - nitrogenase molybdenum-cofactor biosynthesis protein NifN, at 483,756 to 485,081
SMa0873
SMa0874: SMa0874 - NodN dehydratase, at 485,169 to 485,654
SMa0874
SMa0875: SMa0875 - NolG efflux transporter, at 485,661 to 488,858
SMa0875
Position (kb) 485
486 Strain fitness (log2 ratio) -2
-1
0
1
2 at 484.181 kb on + strand, within SMa0873 at 484.265 kb on + strand, within SMa0873 at 484.266 kb on - strand, within SMa0873 at 484.297 kb on + strand, within SMa0873 at 484.297 kb on + strand, within SMa0873 at 484.298 kb on - strand, within SMa0873 at 484.324 kb on + strand, within SMa0873 at 484.328 kb on - strand, within SMa0873 at 484.328 kb on - strand, within SMa0873 at 484.386 kb on - strand, within SMa0873 at 484.387 kb on + strand, within SMa0873 at 484.388 kb on - strand, within SMa0873 at 484.388 kb on - strand, within SMa0873 at 484.491 kb on - strand, within SMa0873 at 484.491 kb on - strand, within SMa0873 at 484.491 kb on - strand, within SMa0873 at 484.536 kb on + strand, within SMa0873 at 484.537 kb on - strand, within SMa0873 at 484.565 kb on - strand, within SMa0873 at 484.565 kb on - strand, within SMa0873 at 484.728 kb on + strand, within SMa0873 at 484.740 kb on - strand, within SMa0873 at 484.828 kb on + strand, within SMa0873 at 484.936 kb on + strand, within SMa0873 at 485.283 kb on + strand, within SMa0874 at 485.287 kb on - strand, within SMa0874 at 485.302 kb on - strand, within SMa0874 at 485.302 kb on - strand, within SMa0874 at 485.520 kb on + strand, within SMa0874 at 485.521 kb on - strand, within SMa0874 at 485.666 kb on + strand at 485.785 kb on - strand at 485.809 kb on + strand at 485.810 kb on - strand at 485.810 kb on - strand at 485.856 kb on + strand at 486.116 kb on + strand, within SMa0875 at 486.116 kb on + strand, within SMa0875 at 486.116 kb on + strand, within SMa0875 at 486.117 kb on - strand, within SMa0875 at 486.117 kb on - strand, within SMa0875 at 486.117 kb on - strand, within SMa0875 at 486.134 kb on + strand, within SMa0875 at 486.236 kb on - strand, within SMa0875 at 486.525 kb on - strand, within SMa0875 at 486.637 kb on - strand, within SMa0875 at 486.637 kb on - strand, within SMa0875
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.4177863333 mM remove 484,181 + SMa0873 0.32 -1.9 484,265 + SMa0873 0.38 +0.4 484,266 - SMa0873 0.38 +2.3 484,297 + SMa0873 0.41 +1.2 484,297 + SMa0873 0.41 -0.1 484,298 - SMa0873 0.41 +0.3 484,324 + SMa0873 0.43 +1.2 484,328 - SMa0873 0.43 -0.2 484,328 - SMa0873 0.43 +0.5 484,386 - SMa0873 0.48 +0.8 484,387 + SMa0873 0.48 -0.0 484,388 - SMa0873 0.48 -0.6 484,388 - SMa0873 0.48 +0.4 484,491 - SMa0873 0.55 +0.8 484,491 - SMa0873 0.55 +0.2 484,491 - SMa0873 0.55 -1.2 484,536 + SMa0873 0.59 +0.2 484,537 - SMa0873 0.59 -0.2 484,565 - SMa0873 0.61 +0.1 484,565 - SMa0873 0.61 +0.6 484,728 + SMa0873 0.73 -0.2 484,740 - SMa0873 0.74 +1.1 484,828 + SMa0873 0.81 -0.1 484,936 + SMa0873 0.89 -1.0 485,283 + SMa0874 0.23 +1.8 485,287 - SMa0874 0.24 -0.2 485,302 - SMa0874 0.27 +0.5 485,302 - SMa0874 0.27 +1.4 485,520 + SMa0874 0.72 +1.3 485,521 - SMa0874 0.72 +0.4 485,666 + +0.4 485,785 - -0.1 485,809 + -0.0 485,810 - +0.5 485,810 - -0.2 485,856 + -0.1 486,116 + SMa0875 0.14 -0.7 486,116 + SMa0875 0.14 -0.3 486,116 + SMa0875 0.14 -1.5 486,117 - SMa0875 0.14 +1.1 486,117 - SMa0875 0.14 +0.6 486,117 - SMa0875 0.14 -1.3 486,134 + SMa0875 0.15 -0.0 486,236 - SMa0875 0.18 -0.8 486,525 - SMa0875 0.27 -0.2 486,637 - SMa0875 0.31 -0.3 486,637 - SMa0875 0.31 +0.3
Or see this region's nucleotide sequence